KEGG   Shigella flexneri NCTC1 (serotype 2a): NCTC1_00626
Entry
NCTC1_00626       CDS       T03751                                 
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase,Deoxyribodipyrimidine photo-lyase,deoxyribodipyrimidine photolyase,deoxyribodipyrimidine photo-lyase, 8-HDF type,FAD binding domain of DNA photolyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
sft  Shigella flexneri NCTC1 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:sft00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sft03400]
    NCTC1_00626 (phrB)
Enzymes [BR:sft01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     NCTC1_00626 (phrB)
DNA repair and recombination proteins [BR:sft03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    NCTC1_00626 (phrB)
 Prokaryotic type
    NCTC1_00626 (phrB)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: CDX05893
UniProt: A0A0H2UXT6 A0A9P2IVE9
Position
1:complement(614072..615490)
AA seq 472 aa
MTTHLAWFRQDLRLHDNLALAAACRNSSARVLALYIATPRKWETHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVDVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IKPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCENGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHRPFIA
WTDRVQWQSNPAHLQAWQKGKTGYPIIDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPITQGEKFDREGEFIRRWL
PELRDVPGKAVHEPWKWAQKAGVKLDYPQPIVEHKEARVQTLAAYEAARKGK
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgactacccatctggcctggtttcgccaggatttacgtctgcacgataatctcgcactg
gctgccgcctgccgcaattcgtctgcacgcgtgctggcgctgtatatcgctacaccacgc
aagtgggagacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatcgcgctggcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttactcatctt
ttttataactatcagtatgaggtgaatgagcgagcgcgggatgtggacgttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgccgggggcggtg
atgaccggcaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgcgtcgctgcaccaaaagttcgtagtagcggatcg
ataaagcccgcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
ttcccggtggaagaaaaagcggcgattgcgcaattacgccagttttgcgagaacggtgct
ggagagtatgagcaacaacgagattttccggcagtggaaggcaccagccgtttgtccgcc
agcttggcaacgggcgggttatcgcctcgccagtgtttgcatcgcttgttggcggaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttagtgagctgatctggcgcgag
ttctaccgtcatctgatgacgtattacccctcgttgtgtaaacatcgtccatttattgcc
tggacggatcgtgtgcagtggcaaagcaatcccgcacatttacaggcctggcagaaaggc
aaaacgggatacccgattattgatgccgctatgcgtcagcttaacagcactggctggatg
cataaccggctacggatgattacagccagttttctggtgaaagatttgttgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagctaataac
ggtggctggcagtgggcggcttctacgggtactgatgctgcgccgtattttcgtattttc
aatccgataactcagggcgagaaatttgaccgtgagggcgagtttattcgtcgatggtta
ccggagctgcgcgatgtaccagggaaagcggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgaagctggattatccgcaaccgatagtcgagcacaaagaggcgagagtacaa
acgttggcagcgtatgaggcggcgcggaaggggaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (2)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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