KEGG T00377: SFV

Shigella flexneri 8401 (serotype 5b): SFV_3308

Entry

SFV_3308          CDS       T00377

Symbol

sun

Name

(GenBank) conserved hypothetical protein

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

sfv Shigella flexneri 8401 (serotype 5b)

Brite

KEGG Orthology (KO) [BR:sfv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfv03009]
    SFV_3308 (sun)
Enzymes [BR:sfv01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     SFV_3308 (sun)
Ribosome biogenesis [BR:sfv03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SFV_3308 (sun)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB Methyltransf_31 Methyltransf_25 FtsJ Methyltransf_5 MTS Cons_hypoth95 Methyltransf_15 Methyltr_RsmF_N Methyltransf_33 Ubie_methyltran

Other DBs

NCBI-ProteinID:

ABF05351

UniProt:

Q0T014

Position

3379894..3381204

AA seq 436 aa
MPSIFILMKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLR
TLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQ
LKGLINGVLRQFQRRQEELLAEFNTRDARYLHPSWLLKRLQKAYPEQWQSIAEANNQRPP
MWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVHALPGFEDGWVTVQDA
SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL
GMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQ
SEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNQP
GAEEGDGFFYAKLIKK

NT seq 1311 nt +upstreamnt +downstreamnt
ttgccgagcatttttatacttatgaaaaaacaacgtaatttacgtagcatggcggcccag
gccgttgaacaagtcgtcgagcaagggcaatcattaagcaacattctgccaccgctccag
caaaaagtttccgataaagacaaagcacttcttcaagagttgtgctttggcgtactgcgt
acgctttcgcagttagactggctgattaataagttaatggcccgtccgatgaccggcaaa
cagcgcactgtgcattacctgattatggttggtttgtatcaactgctttatacccgcatt
ccacctcatgctgcgctggctgaaacggttgaaggcgctatcgcaattaagcgtccgcaa
cttaaagggttgattaacggtgtattacgccagttccagcgtcggcaagaagagttatta
gccgagtttaatacccgtgatgcacgttatctgcatccttcctggttgctgaagcgtctg
caaaaagcgtatccagagcagtggcaatccatcgccgaagccaataaccagcgtccgcca
atgtggctgcgtattaatcgtacgcatcattcccgcgacagctggcttgcattgctggat
gaagcaggaatgaaaggtttcccgcatgcggattaccctgatgctgtacggctggaaaca
cctgcacctgttcatgcgctacctggttttgaagacggatgggttaccgttcaggatgca
tcagcacaaggttgcatgacctggcttgcgccacaaaacggtgaacacatcttggatctt
tgtgccgcccccggcggtaaaacaacgcatatccttgaggtggcaccagaagcgcaggtt
gttgcggttgatattgacgaacagcgcctctctcgcgtttacgacaatttaaaacgcctt
ggtatgaaggcaaccgtgaaacaaggtgatggccgttacccttcccaatggtgtggcgag
caacagtttgatcgcattttattagatgcgccttgttcagcaacgggggtgattcgtcgc
catccagatattaaatggttacgtcgcgatcgcgatatcccggaactcgcgcaattgcag
tctgaaattctcgacgccatttggccgcatttaaaatccggtggaaccctggtctatgcc
acctgttcggtgttaccggaagagaatagcctgcagattaaagcctttttgcaacgtacc
gctgatgccgaactttgcgaaacaggaacaccagagcaaccgggtaaacaaaatcagcct
ggtgccgaagagggcgacggcttcttttacgctaagctaatcaaaaagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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