KEGG   Sinocyclocheilus grahami (golden-line barbel): 107552932
Entry
107552932         CDS       T04918                                 
Name
(RefSeq) collagen alpha-1(XVII) chain-like isoform X1
  KO
K07603  collagen type XVII alpha
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 107552932
NCBI-ProteinID: XP_016090458
Position
Unknown
AA seq 1518 aa
MDDLRQQRNYSGGSSGERGITETISTTRITSLPPRGFSASASKGMSSTSGSPGLEKNILT
QNNSSSFFSSSSVGVSAGGLGSGSGEYLAEETTVSRKTGGASGVFESLSGSGTGSRLRSS
STDGMRRTQVSPLFVERKSKTTHSRRYDGSSSDSSSPEIKRKDYGSTRGRSQSRETEIRT
RLQSASPSTRWTELDDVKKLLKGSRSASVSPTRSPSSSPLPIPRKAKTLDTKISSKQVEQ
YDTTILDADLASYTWNSSTLPSTVSTGTAYGFHSNTNNMSTGATLVNSTSPSSLSVYGFH
NNLAPASGVLTSSGVNTYSGYGVQKNYVTSPSSTLGVGTGVSTAGYGVQKNYSSSPNSTL
AVSTGVSTSGTGTRTLNENVSKRYLTLEKENIPVKRETEELILTKDSGKQFTNSTPNGTA
GSYSDVSMKKETITTSYSESAPVKSRSGAYYGSTSVSTKDKATYAEIHKAKVVDDDDCKC
GGGLCGCGTNCCSWWKWLLGFLLSLLLLLGLLFGLIALSEEVKKLQSRVSALEGISSSMT
AHSSRRSSPNDDIGLYKEAGSKAAYVNSLDSAHSTYNSVLQRHVQQILKAELQSEAMNAF
LASSVKAERGLPGPKGDTGSPGTKGDNGFPGLPGHPGREGGKGSAGEHGPEGPPGFRGRD
GQPGPRGEPGPPGAGEKGERGIPGLPGSPGLVGPPGPKGASGLHGEQGPQGFRGEPGPAG
PKGERGPSGPPGIKGDHGDRGENGMPGVPGAAGRQGPSGEKGAKGSAGPQGPDGEKGQRG
EPGSIGLPGIRGPAGPPGDPGQPGTSGIQGPPGLPGNPGQPGAKGETGEAGRVINAAGSS
SVAIPGPPGRPGPPGPSGAPGLSGPVGPAGLPGQLGPKGNKGDQGEPGIVVNAGETLVAT
RAERQYGAAHVGVNGPPGPPGPPGPPGHPGDSRPGPPGPPGETGAAGYGRPGPKGDKGEP
GNFVPNSGTFFAGPPGPPGPPGPKGVTGAQGPRGYQGEPGQPGLPGSSGRVISEYGVAQG
PSGPPGPPGPPGRDGRKGDPGVPGTSAFQGESRVSGAVAVGPQGRTGPPGPPGLPGPPGH
SGGSHSAADYRRYIMEYMQSDSMRQHLSSIQGPPGPPGLSVSVEDVASRVIAYIQRSGIS
GNSISQGPQGPAGPPGPPGSISADYIISLLQREDVRRYVVGPPGPPGSPGISASTFNAQE
VANYAIRMMNEQGMTGRTGPPGPPGTPGQPGASYSDITALLQRSGLSGSIGRPGPPGPQG
IQGPPGPPGTPGGSSAVSGYKLEEIQLYLQKSGFRGPPGLPGPPGPQGPPGDTSGLVSYS
GSSAREQIRAELQDYLKSDTMRRYVHGPPGPPGLPGQKGEPGHSYHNARSQYRYSSEISE
PVDYSNVALKVTDYIKNQGILQDLTEGYWRTQAGRIQGPAGPPGPPGPPGYSRVIGSYGN
VTADLMDFFRTYGTIPGPPGRPGPKGDRGYPGPKGEKGEMGSSGIPGLSGQRGPEGPRGE
KGEKGDFQTGKWIRTNGA
NT seq 4557 nt   +upstreamnt  +downstreamnt
atggatgatttaagacagcaaagaaactattcaggaggaagttcaggagagagaggcatc
acagaaacaatttctactactagaattacatctttacctccacgaggcttcagtgcatcc
gccagcaagggcatgtcaagcacctctgggtctcctggtctggagaagaacattttgact
cagaacaacagcagttcttttttttcatcgtcatctgtgggtgtgagtgcaggtgggtta
ggctctggatcaggagaatatctggcagaggagacaactgtgagcaggaagacaggtggt
gcctctggagttttcgagagtctctctggttcgggaactgggtcgaggctgagatccagc
tccactgatggcatgagaagaacacaagtctcccctttgtttgtggagaggaaaagcaaa
actactcattcacgtcgttatgatggaagttcaagtgacagctcatccccagaaataaaa
agaaaagactatggttcaactagaggaaggagtcaaagcagggagacggaaatcaggacc
aggctacagagtgcatctccctccactagatggacagagctggatgatgtgaagaagctg
ttgaagggatcacgttcggccagcgtcagccccacacgttctccctcctcctcccctctc
cctatacctcgcaaggccaaaaccttagacaccaagatctccagcaagcaagttgagcaa
tatgacaccactattcttgatgctgacctggcctcatacacatggaacagctccacactg
ccctctacagtctccactggtactgcttacggcttccacagcaacaccaacaacatgtca
acgggagctactcttgttaacagcacatcaccatcctccttatcagtgtatggcttccac
aacaatttagctcctgctagtggagttctaacttccagtggagttaacacatactcagga
tatggagtccagaagaattatgtgacaagtcccagcagcacacttggtgttggcacaggc
gtctccactgcaggatatggagtgcagaagaattattcctcaagtcccaacagcacactt
gctgttagcacaggcgtctctacttcaggaactggtacaaggacccttaatgagaatgtg
tcaaagagatacctgacactggagaaagagaacattccagtgaagagagaaaccgaagaa
cttatcctgaccaaagacagtggcaagcagtttaccaacagcactcccaatgggacagcg
gggtcatattcagatgtttcaatgaagaaggaaactataacgaccagctattctgaaagt
gctcctgtgaagtctagatctggtgcatattatgggtctacatcagtgtcaacaaaagat
aaggctacatatgcagagattcacaaggctaaggttgttgatgacgatgactgtaagtgt
ggagggggtctttgtggatgtgggacaaactgctgttcctggtggaagtggctgctgggg
tttttgctcagtctcctgctgctcctcggccttctgtttggactcattgctttatctgag
gaggtgaagaaactacagtctcgtgtcagtgctcttgagggaatatcctcctccatgaca
gcccactcgagtcgtcggtcctctcctaatgatgacattggcttatataaagaagctgga
agtaaagcggcatatgttaattcactggattctgcacacagtacatacaattctgtactg
cagagacatgtacagcaaatattgaaagcagagctgcagtcagaagccatgaacgccttc
cttgcttcttcagttaaagctgaaagaggacttccagggcctaaaggtgacactggatct
ccaggaacgaagggtgataacggttttccaggcctaccaggacatccaggaagagaagga
ggaaaaggaagtgcaggtgaacatggtccagaaggaccaccgggtttcaggggaagagat
ggtcagcctggaccccgtggagagccaggacccccaggagctggagagaagggtgaaagg
ggtattcctggtcttcctggctctcctggtcttgttggtccacctgggcctaaaggtgct
agtggtttacatggtgaacaaggccctcaaggcttcagaggtgaacctggccctgccggg
cctaaaggtgaaagaggtccctccggtccacctggaattaaaggtgatcatggtgataga
ggagaaaatggaatgccaggtgttcctggtgctgcaggacgacaagggccatctggtgag
aaaggagctaaaggatcagcagggcctcaaggacctgatggtgaaaagggccaaagaggt
gagccaggctcaattggcttaccaggaatcagaggaccagctgggccacccggcgatcct
gggcaaccaggaacttcagggattcaaggacctccaggcctacctggcaatcctggtcag
cctggagctaaaggtgagactggtgaggctggaagagtgatcaatgcagcaggttctagc
tcagtggcaatcccaggaccacctgggaggcctggtcctcctggcccatctggagctcca
ggactctcaggtcccgttggccctgctggacttcctggtcagcttggtcctaaaggtaat
aagggagatcaaggagaaccgggtattgttgttaacgctggtgagactttggttgcaacg
cgagcagaaagacagtacggtgctgcacatgttggtgttaatggaccacctggacctcct
ggtcccccagggcctcctggacatccaggcgattctagaccaggtccaccgggaccacct
ggtgaaacaggtgcagcaggatatggcagacctggtcctaaaggagacaagggagaacca
ggaaactttgtgcctaattcaggaacattttttgcgggaccacctgggccaccaggaccc
ccagggcctaagggagtgacaggtgcccaaggtccaagaggataccagggagaaccaggt
caacctggccttccaggtagttccggtagagttatctctgaatatggtgtggctcaaggt
ccatctggtcccccaggacctcctggaccacccggacgagatggccgtaaaggggatcct
ggagtaccaggtacatcagcattccaaggagaatcaagagtatcaggagcagttgcagtc
gggccacaagggcggactggtcctccaggacctcctggtttacccggtcctccaggtcat
tctggtggatcccattctgctgcagactatcgtcgttacatcatggagtatatgcagagt
gacagcatgaggcagcatttgtctagtattcagggcccacctggtccacctgggctttca
gtgtctgtagaggatgtggcatctcgggttatcgcttacattcagcgctctggaattagt
ggtaacagtattagccaaggtcctcaaggacctgcaggacctcctggcccacctggaagt
ataagtgctgactacatcatttcccttttacagagagaagatgtgaggcgttatgtggtt
ggccctccaggaccaccgggttcacctgggattagtgctagtacctttaatgcacaggaa
gtggcaaactatgccatcagaatgatgaatgagcagggaatgacaggcagaactggacca
ccaggccctcccggcacacctggccagccaggtgcttcctacagtgacataaccgctctg
cttcagaggtcagggcttagtggaagcataggacgtcctgggccccctggtcctcaagga
atacagggaccccctggtccacctggcaccccaggaggctcctctgcagtctcaggttac
aaactagaggaaatccagctctacctacagaaatctggttttaggggacctccaggccta
cctggtccaccaggaccccagggtcctccaggagacactagtggccttgtatcatattca
ggatcttctgcacgagaacagatccgtgctgagctgcaggactacctaaagagtgacact
atgaggcgctatgtacacggtccccctgggccccccggactgcctggtcagaagggtgaa
cctggacacagttatcacaatgccagaagccaataccgttatagctctgagatcagtgaa
ccagtggactactccaatgttgcactcaaagtgactgattacattaagaatcaaggtata
ctgcaggacctgacagagggatactggagaacacaagcaggaaggatccaaggacccgct
ggacctcctggtcctcctgggccacccgggtacagccgtgtgattggttcctacggaaat
gtgacggctgacttaatggacttctttagaacatatgggaccatcccagggcctcctggc
aggccaggacccaaaggagacagaggataccctggacctaaaggagaaaaaggggaaatg
gggagctcagggatacccggcctttcgggacaaagaggaccagagggaccaaggggagaa
aagggtgaaaaaggtgatttccagactggtaaatggattcggaccaatggtgcgtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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