KEGG   Sinocyclocheilus grahami (golden-line barbel): 107559597
Entry
107559597         CDS       T04918                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta isoform X1
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107559597 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107559597 (polb)
Enzymes [BR:sgh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107559597 (polb)
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107559597 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     107559597 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 HHH_5 NTP_transf_2 HHH_2 Cdd1 DUF4806
Other DBs
NCBI-GeneID: 107559597
NCBI-ProteinID: XP_016098970
Position
Unknown
AA seq 338 aa
MSKRKAPQETLNEGITDFLIELANYERNVNRAVHKYSAYRKAASVIAKYPQKIKSGAEAK
KLVQDGVGAKIAEKIDEFLTTGKLRKLEKIRSDDTSSSINFLTRVTGIGPAAARKFYDEG
VRNLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMQIMETLILKELDVVDPEYIGTIC
GSYRRGAESSGDIDILLTHPDFTSQSEKQPKLLHAVVDHLESIGFVTDMLSKGDTKFMGV
CQLQKDEEDEEEYFHRRIDIRLIPKDQYFCGVLYFTGSDIFNKNMRTHALEKGFTLNEYT
IRPLGVTGVAGEPLLVDSEKDIFDYIQWKYKEPKERSE
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgagtaaaagaaaagcgccacaggaaactctgaacgaaggaatcacagattttctcatc
gaattggcaaattatgagagaaatgtcaacagagccgtccataaatacagtgcttacaga
aaagcagcgtctgtgatcgccaaatatcctcaaaagatcaaaagtggggcagaagcaaag
aaactggtacaggatggagttggtgcaaagatagcagagaaaatcgatgagtttttaacg
acgggaaaactgcgcaagctggaaaagattcgcagtgacgacacaagctcctccatcaac
ttcttaacccgagtgactgggatcggtcctgctgcagccaggaagttttatgatgaaggc
gtcaggaacttagaagatctgaagaagatcgagcacaaactcaaccatcatcagcagatc
gggttaaaatactttgaagaatttgagaagagaatccctcgtgcagaaatgcagataatg
gagactctgatactgaaggaactggatgtggtggatcccgagtacatcggcaccatctgc
ggcagctacagacgaggagcagagtcgagtggtgatattgatatactgctgacccatccg
gacttcacctctcagtctgagaaacagcccaaactccttcatgctgtcgtggatcatctg
gagtccatcggcttcgttaccgacatgctttctaaaggagacactaagtttatgggtgtg
tgtcagctgcagaaagatgaggaagatgaagaagagtattttcaccgccgtattgacatc
aggcttatcccaaaagatcagtatttctgcggtgtgctgtacttcaccggcagtgatata
ttcaacaagaacatgaggactcatgcgctggagaagggcttcactctcaacgaatacacc
atccgtccactgggcgtaactggtgtggctggagagcctctgctggtggacagtgagaag
gacatctttgactacatccagtggaaatacaaggaaccaaaggagcgcagcgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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