KEGG   Sinocyclocheilus grahami (golden-line barbel): 107566918
Entry
107566918         CDS       T04918                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03271  Virion - Rotavirus
sgh04145  Phagosome
sgh04510  Focal adhesion
sgh04512  ECM-receptor interaction
sgh04514  Cell adhesion molecules
sgh04530  Tight junction
sgh04810  Regulation of actin cytoskeleton
sgh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    107566918
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107566918
   04514 Cell adhesion molecules
    107566918
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107566918
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107566918
   04530 Tight junction
    107566918
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107566918
   04810 Regulation of actin cytoskeleton
    107566918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sgh04131]
    107566918
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgh04147]
    107566918
   04515 Cell adhesion molecules [BR:sgh04515]
    107566918
   04090 CD molecules [BR:sgh04090]
    107566918
Membrane trafficking [BR:sgh04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    107566918
Exosome [BR:sgh04147]
 Exosomal proteins
  Proteins found in most exosomes
   107566918
Cell adhesion molecules [BR:sgh04515]
 Integrins
  Integrin beta subunits
   107566918
CD molecules [BR:sgh04090]
 Proteins
  107566918
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail I-EGF_1 EGF_2 RBP_receptor
Other DBs
NCBI-GeneID: 107566918
NCBI-ProteinID: XP_016107976
Position
Unknown
AA seq 799 aa
MDLKLLFITLLGIICCSSAQQEGNECIKANALSCGECIQVGAKCGWCTDTQEFLKQGEPT
SARCDELESLRKRGCDKIENPHGSQRILKNKAVTNRKKGAEKLRPEDITQIQPQKLSLNL
RSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFRIG
FGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGEQFNSLVGKQQISG
NLDSPEGGFDAIMQVAVCGEHIGWRNVTRLMVFSTDAGFHFAGDGKLGGIVLPNDGKCHL
ENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSAN
SSNVINLIVDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVNEGENGRKCSNISIGDE
VSFNINITAQGCSKQVKPESIKIKPLGFTEEVEILLNFICECECHKHGIKNSDMCHNGNG
TFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKKRD
NPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDASTCLAS
NKQICNGRGICECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDTCE
RDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNTEKEVHVVEALEC
PAGPDIIPIVAGVVTGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTENPIY
KSPINKFKNPNYGRKAVAL
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggacctgaagctacttttcataacattattagggatcatttgttgcagcagcgcacag
caagagggcaacgagtgcatcaaagccaacgctttatcctgtggcgagtgcatacaagtg
ggggctaaatgtggatggtgcactgatacacaggagtttctgaagcagggcgagccgacg
tcggcgcgctgtgatgagctggagtcgctcagaaagagaggctgcgacaagatcgagaac
cctcacgggagccaaaggatcctcaagaacaaagccgtgaccaaccgcaagaaaggagca
gagaaactccgacccgaggacattacacagatccagcctcagaaactcagcctcaacctc
agatccggggaacctcagaatatcaaactgaagttcaagagggctgaagactatcccata
gacctgtactacctgatggacctgtcctactccatgaaggatgacttggagaacgtcaag
aacctagggactagtctgatgaaggaaatgtccaagatcacctcagatttcagaataggt
tttggctcttttgtggagaagacggtgatgccgtatatcagcacgactccagccaagctc
ctgaacccctgcacaggggaccaaaactgcaccagccccttcagctacaagaacgtgctg
aaactcaccagcaacggggagcagttcaacagtctggtgggaaaacagcagatatctggc
aacctggactcacccgagggggggtttgatgccatcatgcaagtggctgtctgtggagag
cacatcggctggagaaacgtcactcgtttgatggtgttctccacagacgcaggtttccat
tttgccggcgatggcaaactaggtggaatcgtgcttcccaatgatgggaaatgccactta
gaaaacaacgtgtacaccatgagccattattacgattacccatccatcgcccacctggtt
cagaaactgagcgaaaacaacatccagaccatctttgcagttacagaggagtttcagcct
gtttacaaagaacttaaaaacctgatcccgaagtctgcagtggggacgctctctgcaaac
tccagcaatgttatcaatctcattgttgatgcctacaattctctttcttcagaggtgatc
cttgagaacagtaagcttcctgaaggagtgaccatcacctatcagtcgcgctgtaagaac
ggagtggtgaatgagggagagaacggaagaaagtgctctaacatctccatcggagacgag
gtatcgttcaacattaacatcacggctcaaggctgctccaaacaagtcaaacctgaaagc
attaagatcaagcccctgggcttcactgaggaggtggagatcttgctcaacttcatctgc
gagtgtgaatgtcacaagcacggcatcaagaacagtgacatgtgtcataacggcaacggc
acgtttgagtgtggagcctgcaggtgcaataagggacgtgtgggcaggcagtgtgaatgc
cgaaaagacgaggtgtccaccgaagacctggacaagaactgccgcaaggacaacggcacg
gacatctgcagcaataacggcgagtgcgtgtgtggcacctgcgagtgcaagaagagggac
aatcctgaagagcgctacagcggcaaattctgcgagtgtgacaacttcaactgcgaccgc
tccaataataaactctgcggaggacacggccgctgtgagtgcagggtgtgtatctgtgac
gctaactacacgggaagcgcgtgcgactgctctctggacgcctccacctgcttagcctcc
aacaagcagatctgtaacggccgggggatctgtgagtgcgggacctgcaggtgcaccgac
cccaagttccaggggcccacctgtgagatctgccccacctgccccggagtctgtactgag
cacaaggagtgtgtgcagtgccgggcgtttggcacaggagagaagaaagacacttgtgag
agagactgtagctacttcaacctcatcaaggtgaaggacagagataaactccctcagccg
gtgcaggccttccccctcatgcactgcaaggagagagacgccaacgactgctggttctac
tacacctacgccgtcaacaacacggagaaggaggtgcatgtggtggaggctttagagtgt
ccggcgggtcctgacatcattcccatcgtagcgggcgtggtcacaggcatcgttctgatt
ggtctagctctgctcctgatctggaagctgctcatgatcattcacgaccgccgcgagttc
gccaagtttgagaaggagaagatgaacgccaagtgggacacgacagagaatccaatttac
aagagccctattaataaattcaagaacccaaactatggacgtaaagctgtggctctataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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