KEGG   Sinocyclocheilus grahami (golden-line barbel): 107582928
Entry
107582928         CDS       T04918                                 
Name
(RefSeq) protein CASC3-like
  KO
K14323  protein CASC3
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013  Nucleocytoplasmic transport
sgh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107582928
   03015 mRNA surveillance pathway
    107582928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107582928
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107582928
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 107582928
NCBI-ProteinID: XP_016124439
Position
Unknown
AA seq 743 aa
MADRRRRRRRASQDSEEEDESASGSESGRALSAGRKPRGRDPEPVESPAERVGAKIGDES
ECESEDGVGEGERGGEEEEEAAEHFSDEEASRPAAEPKPAADAPTEELGEEEERDGGDKE
VKDDEKGNLAGERQSGDGQESTEDPENKSGSKGQKLDDDEDRKNPAYIPRKGLFFEHDVR
GQATEEERPKGRHRKLWKDEGRWDHDKFREEEQAPKSREELIAFYGYDIRNGTGSSDGRS
YRSRKPRHAGSPIREPRRHREGEKSVRTTWQAPPPGHRNTPQSVILQSGPPPGPPAAPKS
SGRPSTQPPHRSFQSSRALSAPHRTEGQRHSKPSLDGPPPRGVRPQPVEGERGLRLRGRG
SHAVHADHSPATVVEDIRSEEEEEEGEIPTATTTYTAHHYRTERERVPSPRKQESGPAME
GGNAASRVRESSPPQERPVEKKSYSLARRATRTRPSDLAKQASLDDSSPAVQQTPAAAKS
ESWQEQSDAGTQGGLTGLDQDLAQLSLAGQNWAQSPPSYLQAEMRGIRSSVHMAGGPPQY
GNMEDIGVGGGRAKRYSSQRQRPVPEPAPMHIGVMEGHFYEPMSFQGPIYTHGDSPAALP
PQGMLVQPEMHLPHPTHPGHPGLHPHQSGGPLPNPALYAAPPVSMSPGQPPPQQLLPPPF
YPPPGVMTFGNTNYPYPAGATLPPMYPNPQAQAQVYGGVTYYDTVQQQAQPKRSPPRRSS
HPVTVRPPPPEDQGRNPAEEIRS
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcgacggagacggcgcgcctctcaggacagcgaggaggaggacgag
tccgcctcgggctccgagagcgggagagccctctcggccggccggaagcctcgcggaaga
gaccccgagccggttgaatcgccagcggagcgcgtcggcgccaaaatcggcgatgagtcg
gagtgtgaaagtgaagatggcgttggtgaaggtgagcgtggaggagaggaagaggaggag
gcggcagagcatttcagtgatgaagaggcctcacgtcctgccgcagaaccgaagcccgct
gcagatgccccgacagaagagcttggtgaagaggaggagagagatggaggggacaaggaa
gttaaagatgatgagaaggggaatctagctggggagcgccagagtggggacggacaggaa
agcaccgaggaccctgagaataaatcgggcagcaaaggccagaagctggacgatgatgag
gaccggaagaatccagcctacatcccccgaaaaggccttttctttgagcacgacgtgaga
ggccaggctacagaggaggagaggcctaaaggcaggcacaggaagttgtggaaggacgag
ggccgttgggatcacgacaagttccgtgaagaggagcaggcgccaaaatcacgcgaagag
ctaattgctttttatggttatgacatccgtaacggcactgggtcgagtgatggacgatcg
taccgctcccgaaaacccagacatgctggttcacccattcgggagcctaggcgccatcgt
gaaggtgagaagtcggtgcgtacaacatggcaggcgcctccacctggccatcgcaacacc
cctcagtctgttatcctgcagtcaggcccacctcctggtccccctgcagcacccaaatcc
tccggccgaccctcgacccagcccccacatcgcagcttccaaagtagtcgagctctgtca
gccccccacaggacagaagggcagagacactcgaagcccagtctagatggcccaccacct
cgaggagtgcggccacagcctgtagaaggtgagaggggcctgcggctcaggggccgtggt
tcacatgctgttcacgctgaccatagcccagccacggtggtggaggacatccgcagtgag
gaagaagaggaggagggtgagattccaacagcgacaactacatataccgctcaccactac
aggacagagagagagagggttccgtcaccacgcaaacaagagtctggcccagcgatggaa
gggggcaatgcagccagtcgggtgcgagaatcgtctcctcctcaagagaggccggtggaa
aagaaatcatactctcttgcacggagggcgacgcgaacacgaccgtctgatctcgctaag
caagcgtcgttagatgactcctcacctgcggtccagcaaaccccggcggcagcaaagagt
gagtcgtggcaagagcagagtgatgctggaacgcaaggtggactgacagggctcgaccag
gacctggcccaactcagcctggctggacagaactgggcccaaagccctccctcctacttg
caggctgagatgagaggcatccgtagctcagtgcacatggcaggagggcctccacagtat
ggaaacatggaggatattggtgttggtggtggccgggctaagcggtattcatcacagcgc
cagaggccagttcccgagcctgcacccatgcacataggagtcatggagggccatttttat
gaacccatgtctttccagggaccaatctacacacacggcgacagtccagcggccctgccc
cctcaaggcatgcttgttcagcctgagatgcacctgccacaccccacccatcccggacac
ccaggtttacacccgcaccagtcaggagggcccttgcccaatccggctctttacgccgcc
ccacctgtttctatgtcacctgggcaaccgcctccacagcagctgctacccccacccttc
taccccccgccaggtgtcatgacctttgggaacaccaactatccgtaccctgccggagct
acgctacctccaatgtaccccaatccccaagcacaggcacaggtctacggtggtgtgacg
tactacgacacggtacagcagcaagctcagcccaaacgctccccgccccgacgttcctct
catcccgttacagtcagacctccccctcctgaggaccagggcagaaatcccgctgaggag
attcgctcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system