KEGG   Sinocyclocheilus grahami (golden-line barbel): 107591521
Entry
107591521         CDS       T04918                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010  MAPK signaling pathway
sgh04137  Mitophagy - animal
sgh04141  Protein processing in endoplasmic reticulum
sgh04210  Apoptosis
sgh04217  Necroptosis
sgh04621  NOD-like receptor signaling pathway
sgh04622  RIG-I-like receptor signaling pathway
sgh04920  Adipocytokine signaling pathway
sgh05132  Salmonella infection
sgh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107591521
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107591521
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    107591521
  09143 Cell growth and death
   04210 Apoptosis
    107591521
   04217 Necroptosis
    107591521
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107591521
   04622 RIG-I-like receptor signaling pathway
    107591521
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    107591521
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107591521
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107591521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107591521
   04121 Ubiquitin system [BR:sgh04121]
    107591521
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107591521
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     107591521
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    107591521
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 ATG16 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-RING_6 MATH Tropomyosin PIN_9
Other DBs
NCBI-GeneID: 107591521
NCBI-ProteinID: XP_016136172
Position
Unknown
AA seq 586 aa
MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCFYCFNR
TVGSGPQKCNACIKEDIFEEPTSILVQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRLNEKERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMSVEKEKIHDHERACA
HEHLNLLLHYIMGMKVRLEGLQPQSLELAGHKAHELHQALRDLETRVSQLSAIPGPTGPP
VQGVPSSSSSSSSSSAVPPPPATLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQEL
EVKAGTFEDVVCVLNREVERFATTTEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTV
AEMEGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIY
LNGDGTGRGTHLSLFFVVMRGMNDALLKWSFNQKVTLMLLDQSNREHIIDAFRPDITSSS
FQRPVSEMNIASGCPLFCPLSKLEGKNSYIRDDTIFIKAIVDLTGL
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggctgctcaagaaccctctcccccgtcctccatggagaacaataagccagggttccca
aagaagattctggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgagaagaccgttccaagcgcagtgcggccatcgcttttgtttttactgcttcaaccgg
actgttggatctggaccgcagaaatgtaatgcctgtatcaaggaggacatcttcgaagag
cccacgtcaatcctcgtacaaggatgcgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagctgtgtgcttcaacgaaggctgctcctggaaaggcagtattaaagat
tatgagttgagccatgaggggaagtgtgagttcatgattctgccgtgtcccttgtgcaaa
gagctcattagactgaacgaaaaggagcgtcataatgaacgcgagtgtcctgagagaacg
ctcaactgcaagtactgtaaagagccatttcacttcaaaaacatcaaggcccatgatgag
atctgtcccaaatatcccatgatttgtgaaggatgtgcaaagaagaaaatccccagggaa
aagtatgttgaccacatcaagttctgcagcaaattcaggactccgtgcagatatcatgtg
gttggctgcgacatgtcagtggagaaggagaagatccacgatcacgagcgtgcctgtgct
cacgaacatctcaacctgctgttgcactacatcatgggcatgaaggtccgtctggagggc
ctgcagccccaaagcctggagctggccggtcacaaagcacacgagcttcaccaggcgctc
cgagacctggagaccagagtcagtcagctgagcgccatccccggcccgaccggacctccc
gtgcagggggtcccctcctcttcatcttcatcctcgtcctcctccgccgtgcctccgcct
cctgccacgctgcccacctccttcactcctctgcccagctcggtgggcgcagcgctggag
ctccagctgcacagcgagaagaccaaggtggcggatctgggccgtcgctgccaggagctg
gaggtgaaggcggggacgtttgaagacgtggtctgcgtgctaaaccgagaagtggagcgc
ttcgcaaccaccacggaggccagcaaccgccaacacagactcgatcaggacaaaatcgag
gctcttagtaacaaggttcgtcagctggagcggcaggtgggcgttaaagacctgactgtg
gctgaaatggagggcagattgcgggagatgtctgccaccacgtttgacggcgtcttcatc
tggcggatatcagatttcactaaaaagagacaagatgccattgccggacgggcgcctgcc
atgttttcacccgcattttacacaagcaagtacggctataagatgtgcctgcggatttac
ctgaacggggacgggacgggtcgtggaacgcatctctcgttgttttttgtggtgatgaga
ggaatgaatgacgcactgctcaaatggtctttcaaccagaaggtgacgctgatgctgctg
gaccagagtaacagagagcacatcattgacgcgttccgtcccgacatcacttcctcctca
ttccagaggcctgtaagcgagatgaacatcgccagcggctgcccgctcttctgtccgctg
tccaagctggagggcaagaactcatacatacgtgacgacaccatcttcatcaaagcaatc
gtggacctcactggcctttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (10)   
   KEGG PATHWAY (10)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (36)   

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