KEGG   Sinocyclocheilus grahami (golden-line barbel): 107593584
Entry
107593584         CDS       T04918                                 
Symbol
shfm1
Name
(RefSeq) 26S proteasome complex subunit DSS1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03050  Proteasome
sgh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    107593584 (shfm1)
  09124 Replication and repair
   03440 Homologous recombination
    107593584 (shfm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107593584 (shfm1)
   04131 Membrane trafficking [BR:sgh04131]
    107593584 (shfm1)
   03051 Proteasome [BR:sgh03051]
    107593584 (shfm1)
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107593584 (shfm1)
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     107593584 (shfm1)
Membrane trafficking [BR:sgh04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    107593584 (shfm1)
Proteasome [BR:sgh03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     107593584 (shfm1)
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     107593584 (shfm1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 107593584
NCBI-ProteinID: XP_016138848
UniProt: A0A672QA62
Position
Unknown
AA seq 70 aa
MSEKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagagaagaaacaaacagtggatttggggctgttggaggaggatgatgaatttgaa
gaattcccagcagaggactggacgggcctggatgaagatgaggatgctcatgtttgggaa
gataactgggatgatgacaacgtagaggatgacttttctaatcagctgagagcggagctt
gaaaaacacggatacaagatggaaacctcttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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