KEGG   Sinocyclocheilus grahami (golden-line barbel): 107594867
Entry
107594867         CDS       T04918                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107594867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107594867
Enzymes [BR:sgh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     107594867
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107594867
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107594867
SSDB
Motif
Pfam: Exo_endo_phos LRR_4 LRR_8 LRR_1
Other DBs
NCBI-GeneID: 107594867
NCBI-ProteinID: XP_016140558
UniProt: A0A672RL58
Position
Unknown
AA seq 558 aa
MPTEKYDPPDFRQMYTIMSSEEANSGKKSIWDGLEIIGNVRSLSSGLWSLTHLTALHLSD
NSLSRIPPEIAKLHNLVFLNLSSNKVRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLTQEIMTLYQEPDGTRRLLNYLLDNLAGAIKRIPTEPPPSRSWIVLQEP
ERTRPTALLTVMCYNVLCDKYATRQLYGYCPSWALNWSYRKKSIMQEILSCNADIISLQE
VETEQYYKYFIVELSKQGYDGFFSPKSRARTMSESDRKHVDGCAIFYKTEKFSMVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELKKELIELSPGKSIHAMEKQLFLVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLKLSSVSGETSSIPLVLCADLNSLPDS
GVVEYLSTGGVDYTHKDFKELRYSDSLTNFNCNGKNGTSNGRITHGFKLKSVYENVLMPY
TNYTFDFKGVIDYIFYSRPQLNVLGVLGSLDTNWLLENNISGCPHPHIPSDHFSLLAQLE
LVLHYPPVLNGVHLAGHR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcccacagagaaatatgacccacctgatttcaggcagatgtacactatcatgtccagt
gaggaggcaaacagtgggaaaaaatccatctgggatgggcttgaaataattggtaatgtt
cggagtctcagctcgggcctttggtcgctcactcacctcactgctctgcatctcagtgac
aactccctgtcacgcattccacctgaaattgccaagctgcacaaccttgtgttcttgaac
ctttcatccaataaggtcaggagcctgccagcagaacttggcaacatggtgtctctcagg
gaactacttttaaataacaaccagttgcgggttctgccattcgaattggggaaattgttt
cagttacaaacactggggttgaaaggcaatccactcactcaagaaattatgactctctac
caggagccagatggtacccggcgactgctgaactaccttttggacaatcttgctggtgct
atcaagcgcatcccaacagagccacctccgtccaggtcctggattgtgctgcaggagcct
gaaaggacaagaccaaccgccctgttaactgtaatgtgctacaatgtgctgtgtgataag
tacgccacacgccagctctatggctactgcccatcctgggcccttaactggagctacagg
aagaagtccataatgcaggagatcctcagctgcaatgcagatattatcagcttacaggaa
gtggagacagagcagtattacaaatacttcattgtggagctgagtaaacagggatatgat
ggattctttagcccaaaatcccgggccagaaccatgtctgaatcggacaggaaacatgta
gatggatgtgcaatattctacaagactgaaaagttcagcatggtgcagaaacacacagta
gagtttaaccagctggctatggccaattcagagggctcagaggctatgctgaatcgtgtc
atgaccaaagacaacattggagtggctgtgctgctggagctaaagaaggagttaatagag
ttgtcaccaggtaagtctatccatgctatggagaaacagctctttcttgtggcaaatgct
cacatgcattgggacccagaatattctgacgtgaagctggtgcagaccatgatgttcctg
tcagaggtgaagaatatcatagacaaagcctcccgtagtctgaagctctcctccgtatct
ggagaaaccagcagcatccctttggtgctttgtgccgacctcaactcacttcctgactcg
ggtgttgtggagtacctgagcacaggtggggtggactacacacacaaagacttcaaggag
ctgcgctacagtgacagtctgaccaacttcaactgcaacggcaaaaacggcacatctaac
gggaggatcacgcatggtttcaagctgaagagtgtctatgagaacgtgcttatgccttac
accaattacacttttgacttcaagggtgtcattgactacatcttctactccagaccacaa
ctgaacgtgctgggcgtcctcgggtctttggacacaaactggctcctggagaacaatatc
agtggttgcccacaccctcacatcccctcagatcacttctccctgcttgcacaactggag
ttggtcctgcattatcctcccgttctcaatggagtccacttagctggacacaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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