KEGG   Sphingopyxis granuli: SGRAN_3532
Entry
SGRAN_3532        CDS       T04372                                 
Symbol
lysA
Name
(GenBank) DAP decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sgi  Sphingopyxis granuli
Pathway
sgi00300  Lysine biosynthesis
sgi00470  D-Amino acid metabolism
sgi01100  Metabolic pathways
sgi01110  Biosynthesis of secondary metabolites
sgi01120  Microbial metabolism in diverse environments
sgi01230  Biosynthesis of amino acids
Module
sgi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sgi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SGRAN_3532 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SGRAN_3532 (lysA)
Enzymes [BR:sgi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     SGRAN_3532 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AMG75874
UniProt: A0AA86GQ64
Position
complement(3870605..3871864)
AA seq 419 aa
MDHFQYRDGVLHAEDIPLPRIAEEIGTPVYVYSRATLERHAQVFRDALKDVPKKHIAFAI
KCNPNLGVLRVLARQGYGADVVSGGELERAIAAGMAAEDIVFSGVGKTRAELALGLDRGI
GQFNIEHEAEGVALAQIALAKEMTARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDVAP
EIFGRLAALPGLQMRGIALHIGSQLTSLDPLEAAFERAGRLVADLRAAGHSITHVDLGGG
LGVPYRPDDDPPSPAEYGAMVARVTRDWDVTLLFEPGRVIAGNTGVLLTEVLWVKPGATN
PFVIVDAAMNDLARPALYDAYHDFVAVKPTGEKMTASIVGPVCETGDTFARDRAIDAVEA
GDLAVFRTAGAYGATMASTYNSRSLVPEVLVDGDRYIVVADRIAAGTIMAAERVPDWIE
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggaccattttcaatatcgtgacggcgtcctccacgccgaggacattcccctgccgcgc
atcgccgaggagatcggcacccccgtctacgtctattcgcgcgcgacgctggagcgccat
gcgcaggtgttccgcgacgcgctgaaggacgtgccgaagaagcacatcgccttcgcgatc
aagtgcaaccccaacctcggcgtgctgcgcgtcctcgcgcggcagggctatggcgccgac
gtcgtgtcgggcggcgagctcgaacgcgcgatcgccgcgggcatggcggcggaggacatc
gtcttttcgggcgtcggcaagacgcgcgccgagctggcgctcgggctcgaccgcggcatc
ggccagttcaacatcgagcatgaagccgaaggcgtcgcgctggcccagatcgcgctggcg
aaggaaatgaccgcgcgcgcggtgctgcgcgtcaaccccgacgtcgacgccggcacccac
gccaagatctcgaccggcaaggccgagaacaagttcggcgtcggcatcgatgtcgcgccg
gagatattcggccgactcgccgcgcttcccggcctccagatgcgcggcatcgcgctccac
atcggcagccagctcaccagtctcgacccgctcgaagcggcgttcgagcgcgccggccgc
cttgtcgccgacctgcgcgcggcggggcacagcatcacccacgtcgacctcggcggcggt
ctcggcgtgccctatcgccccgacgacgatccgccgagcccggccgaatatggcgcgatg
gtcgcgcgcgtgaccagggactgggacgtcaccctgctgttcgagcccggccgcgtgatc
gcgggcaacaccggcgtgctgctgaccgaggtgctgtgggtcaagcccggcgcgaccaat
cccttcgtgatcgtcgatgccgcgatgaacgacctcgcacgcccggcgctctacgatgcg
tatcatgatttcgtcgcggtgaagccgaccggcgaaaagatgacggcgtcgatcgtcggc
ccggtgtgcgagaccggcgacaccttcgcgcgcgaccgggcgatcgacgcggtggaggcg
ggcgacctcgccgtcttccgcaccgcgggcgcctatggcgcgacgatggcctcgacctac
aacagccgcagcctcgtgcccgaggtgctggtggacggcgaccgctacatcgtcgtcgcc
gaccgcatcgccgcggggacgatcatggccgccgagcgcgtgccggactggatcgagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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