KEGG   Streptomyces griseus: SGR_1137
Entry
SGR_1137          CDS       T00691                                 
Name
(GenBank) putative NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sgr  Streptomyces griseus
Pathway
sgr03030  DNA replication
sgr03410  Base excision repair
sgr03420  Nucleotide excision repair
sgr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SGR_1137
   03410 Base excision repair
    SGR_1137
   03420 Nucleotide excision repair
    SGR_1137
   03430 Mismatch repair
    SGR_1137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgr03032]
    SGR_1137
   03400 DNA repair and recombination proteins [BR:sgr03400]
    SGR_1137
Enzymes [BR:sgr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SGR_1137
DNA replication proteins [BR:sgr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SGR_1137
DNA repair and recombination proteins [BR:sgr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SGR_1137
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SGR_1137
   MMR (mismatch excision repair)
    DNA ligase
     SGR_1137
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SGR_1137
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT PTCB-BRCT HHH UPF0758_N DNA_ligase_ZBD BRCT_2
Other DBs
NCBI-ProteinID: BAG17966
Kitasato: SGR1137
UniProt: B1VUC2
Position
complement(1340614..1342773)
AA seq 719 aa
MSVVGGRMVAMTNSAAVLADAAAYAAAVEEASLAAAAYYATGESALDDDAYDRLARGIAA
YEADHPEEVLADSPTGKVAGGAAVGDVPHTVPMLSLDNVFSAEQFVTWTASLERRIGRPV
TAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDVSHAAGAVVGLPERLAEPVTIEV
RGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAGTLRAKDRAYRVETTFFAYGALPLPD
SGELGEALAELPHSEVLAYVAGLGVHTAAGTAVAPLRATTVEEVQARVDGIGALRAALPF
GIDGIVIKADLAADQQEAGSGTRAPRWAVAYKLPAVEKITRLLAVEWNVGRTGIIAPRAV
LEPVEIDGSTVGYATLHNPADITRRDLRLGDQVMVYKAGDIIPRIEAPVVHLRTGDETPI
AFPESCPQCGSEIDASEQRWRCTRGRDCRLVASVSYAAGRDQLDIEGLGSTRVVQLVDAG
LVADFADLFTLRREQLLALDRMGETSTDNLLAAIETARTRPLSRVFCALGVRGTGRSMSR
RIARHFATMDRIVAADAESLQRVDGIGKEKAAAVVAELVELAPLIGKLVAAGVSMTEPGA
TPPPDPGTEEAAAPATADAGAPGGDAATGSALPLAGMTVVVTGAMSGALEKLSRNQMNEL
IERAGGKSSSSVSRRTTLLVAGEKAGSKRAKAEDLGVRIAVPEEFAELVGAFLTAGEEA
NT seq 2160 nt   +upstreamnt  +downstreamnt
ttgtcagtggtgggcggaagaatggtggccatgacgaactcagctgctgtgctcgccgat
gccgccgcctacgccgccgcggtggaggaggcctccctcgccgccgccgcgtactacgcc
acgggcgagagcgcgctggacgacgacgcctacgaccggctcgcgcgcggcatagccgcg
tacgaggcggaccacccggaggaggtgctcgccgactccccgacgggcaaggtcgcgggc
ggggccgccgtcggcgacgtgccgcacacggtccccatgctctcgttggacaacgtgttc
tcggcggagcagttcgtcacctggaccgcttcgctggagcgccggatcggcaggccggtg
accgcctggagcgtggagcccaagctcgacggcctggccgtcgccgcgcgctaccgggac
ggccggttcgagcgcctcatcacccggggcgacggcaccgccggtgaggacgtctcgcac
gcggccggcgccgtcgtcggcctgccggagcggctcgccgaaccggtcaccatcgaggtg
cgcggcgagatcctcatgacgaacgagcagttcgcacagggcaacgcgatccgcacggaa
cacggcggcgcccccttcgccaacccgcgcaacggggcggcggggaccctgcgcgccaag
gaccgcgcctaccgggtggagaccaccttcttcgcctacggcgccctgccgctgcccgat
tccggggagctgggcgaggccctcgccgaactgccccacagcgaggtcctggcgtacgtg
gccggtctcggcgtgcacaccgccgcgggcaccgccgtcgcgccgctccgggccaccacg
gtcgaggaggtccaggcgcgggtggacgggataggcgccctgcgcgccgcactgccgttc
ggtatcgacgggatcgtgatcaaggccgatctggcggccgaccagcaggaggccggctcc
ggcacccgcgcgccccgctgggccgtcgcctacaagctgcccgccgtggagaagatcacc
cgcctgctggccgtcgagtggaacgtcgggcgcacgggcatcatcgccccccgcgccgtc
ctggaaccggtggagatcgacggctccaccgtcggctacgccaccctgcacaaccccgcc
gacatcacccgccgcgacctgcggctgggggaccaggtcatggtctacaaggccggcgac
atcatcccgcgcatcgaggcccccgtggtgcacctgcgcaccggcgacgagacgcccatc
gccttccccgagagctgcccgcagtgcggctcggagatcgacgcgagcgaacagcgctgg
cgctgcacccggggccgcgactgccgtctggtcgcctccgtctcctacgcggcggggcgc
gatcagctcgacatcgagggcctcggttccacccgggtcgtccagctcgtcgacgcgggc
ctcgtcgcggacttcgcggacctgttcactctgcggcgggagcagttgctcgcgctcgac
cggatgggggagacctccacggacaacctcctggcggccatcgaaaccgcccggaccagg
ccgctgtcccgcgtcttctgcgccctcggcgtacggggcacggggcgttccatgtcgcgc
cgcatcgcgcgccacttcgccacgatggaccggatcgtcgccgccgacgcggagtcgctc
cagcgggtcgacggcatcggcaaggagaaggcggcagcggtggtggccgagctggtggag
ctggcgccgctgatcggcaagctcgtcgcggccggggtgtccatgacggagcccggagcg
accccgcccccggaccccgggacggaggaggcggctgcccccgcgacggcggacgcgggc
gcgcccggcggcgacgccgcgacgggctcggcgctgcccctggcggggatgaccgtggtg
gtcacgggcgcgatgtccggtgcgctggagaagctgtcgcgcaaccagatgaacgagctg
atcgagcgggcgggcggcaagtcgtcctccagcgtctcccggcgcacgactctgctggtg
gccggggagaaggccggatccaagcgtgccaaggcggaggacctgggggtcaggatcgcg
gtgccggaggagttcgcggagctggtcggcgccttcctgacggcgggggaggaggcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   KITASATO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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