KEGG   Streptomyces griseus: SGR_724
Entry
SGR_724           CDS       T00691                                 
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sgr  Streptomyces griseus
Pathway
sgr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SGR_724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sgr03400]
    SGR_724
Enzymes [BR:sgr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SGR_724
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SGR_724
DNA repair and recombination proteins [BR:sgr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SGR_724
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS zf-TFIIB Ribosomal_S13 NFACT_N Zn-ribbon_8 DUF637
Other DBs
NCBI-ProteinID: BAG17553
Kitasato: SGR724
UniProt: B1VRY5
Position
complement(855178..856038)
AA seq 286 aa
MPELPEVEALRVFLDDHLVGKEIARVLPLAISVLKTYDPPLSALEGTTVTSVARHGKFLD
IEAGGLHLCTHLARAGWLRWKDSFPAAPPRPGKGPLALRLITVDGDGFDLTEMGTRKRLS
VHLVHDPADVPGIARLGPDPLADAFDRDAFAALLAGERRQIKGALRDQSLIAGIGNAYSD
EILHVAKMSPFKRTADLDEDDVTRLYTALRSTLQDAVTRSSGVEAGKLKAEKKTGMRVHG
RTGEACPVCGDTILEVSFSDSSLQYCPTCQTGGKPLADRRLSKFLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgaagccctgcgggtcttcctcgacgaccacctggtcggc
aaggagatcgcccgcgtcctcccgctggcgatcagcgtcctgaagacgtacgacccgccg
ctgagcgccctggagggcacgaccgtcacctcggtcgcccgccacggcaagttcctcgac
atcgaggcgggcgggctccacctgtgcacccacctcgcccgggccggctggctgcgctgg
aaggactccttcccggccgccccgccccgccccggcaagggacccctcgccctgcgcctg
atcaccgtcgacggcgacggcttcgacctgaccgagatgggcaccaggaaacgcctctcc
gtccacctcgtccacgaccccgcggacgtccccggaatcgcccgcctcggcccggacccc
ctcgccgacgccttcgaccgcgacgcgttcgccgcgctgctcgccggggagcgccgccag
atcaagggagcgctgcgcgaccagtcgctcatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacgtcgcgaagatgtccccgttcaaacggaccgccgacctcgacgaggac
gacgtcacccgcctgtacaccgccctgcgcagcacgctccaggacgccgtgacccgctcc
agcggggtggaggccggaaagctcaaggccgagaagaagaccgggatgcgggtccacgga
cgtaccggagaggcctgcccggtgtgcggggacaccatcctggaggtctccttcagcgac
tcctcgctccagtactgccccacctgccagaccggcggcaagccgctggccgaccggagg
ctctcgaagttcctgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   KITASATO (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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