KEGG   Shewanella sp. MR-4: Shewmr4_3562
Entry
Shewmr4_3562      CDS       T00388                                 
Name
(GenBank) protein translocase subunit secA
  KO
K03070  preprotein translocase subunit SecA [EC:7.4.2.8]
Organism
she  Shewanella sp. MR-4
Pathway
she02024  Quorum sensing
she03060  Protein export
she03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:she00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Shewmr4_3562
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Shewmr4_3562
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Shewmr4_3562
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:she02044]
    Shewmr4_3562
Enzymes [BR:she01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Shewmr4_3562
Secretion system [BR:she02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Shewmr4_3562
SSDB
Motif
Pfam: SecA_DEAD P-loop_SecA SecA_SW SecA_PP_bind SEC-C DEAD Helicase_C Rrp44_S1
Other DBs
NCBI-ProteinID: ABI40627
UniProt: Q0HE90
Position
complement(4262299..4265025)
AA seq 908 aa
MFGKLLTKVFGSRNDRTLKGLQKVVNKINALEADYEKLTDEQLKAKTAEFRERLAAGASL
ESIMAEAFATVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNA
LTGKGVHVITVNDYLARRDAENNRPLFEFLGLTVGINVAGLGQQAKKDAYNADITYGTNN
EFGFDYLRDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKIN
TLIPNLIRQDKEDSEEYVGEGDYSIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYS
AANISLLHHVNAALRAHTLFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVEAK
EGVRIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVR
KDMADLVYLTANEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQVLN
AKFHEKEAEIVAQAGRTGAVTIATNMAGRGTDIVLGGNWNMEIEALENPTAEQKAKIKAD
WQERHDAVVAAGGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFAS
DRVSGMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVY
AQRNELMDAESIEDTIKNIQDDVISAVIDQYIPPQSVEELWDVPGLEQRLQQEFMLKLPI
QEWLDKEDDLHEETLRERIITSWSDAYKAKEEMVGAPVLRQFEKAVMLQTLDGLWKEHLA
AMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLSTLKHDVISVLSKVQVQAQSDVEEM
EARRREEDAKIQRDYQHAAAEALVGGDDGSDEMMAHTPMIRDGDKVGRNDPCPCGSGRKY
KQCHGKLS
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgtttggtaaattactgacaaaagtatttggtagtcgcaacgaccgtaccctcaaaggg
ttacaaaaagtagttaataagattaatgcgcttgaagccgattatgaaaaattaaccgat
gaacagcttaaggcgaaaaccgccgagttccgcgagcgtttagcggccggagcttcgtta
gagagcattatggcggaagccttcgcgaccgtgcgtgaagcatcgaagcgagtgttcgag
atgcgtcacttcgacgtgcagttactcggtggtatggtgctcgacagtaaccgcatcgct
gaaatgcgtaccggtgaaggtaaaaccttaaccgcaactctgccagcctatttaaatgcc
ttaactggcaaaggcgttcacgttattaccgtcaacgattacttagcccgtcgtgacgcg
gaaaataaccgcccactgttcgaattcttaggcttaactgtcggcattaacgttgcaggt
ttgggccagcaagcgaaaaaagacgcctacaacgccgatattacctacggtaccaacaac
gaatttggtttcgactatctgcgcgacaacatggcgttctcgccacaagagcgtgttcaa
cgtccattgcactatgcactgatcgacgaagtcgactcaatccttatcgatgaagcccgt
acgccattgattatctctggtgccgcggaagatagctctgagctatacatcaagatcaac
acgcttatcccgaatcttatccgtcaagataaagaagactctgaagagtacgtgggtgag
ggtgattacagcatcgatgaaaaagccaaacaagtgcacttcaccgagcgtggccaagag
aaggttgagaacctattgattgagcgcggcatgttagccgaaggcgactctctctactct
gcggcgaacatttctctgctgcaccatgtgaacgctgcgctgcgtgctcatactctgttt
gaacgcgatgtcgactatatcgttcaagatggcgaagtgatcatcgtagacgaacacact
ggtcgtactatgcctggtcgtcgttggtcagaaggcttacaccaagccgttgaagccaaa
gaaggcgtgcgtatccaaaacgaaaaccaaacgctggcatcgattaccttccaaaactac
ttccgtttatatgagaagttagcgggtatgacaggtacagccgataccgaggcgttcgag
ttccaacacatctatggtttagatactgtggttgtgcctacgaaccgtccaatggttcgt
aaggatatggccgatctggtttacctcacagccaatgaaaaataccaagcaattattaaa
gacattaaagactgccgtgaacgtggccagccagtattggtgggtacggtttccatcgaa
cagtctgaactgttagcgcgtttgatggtgaaggagaagatcccacaccaagtgcttaac
gctaagttccacgaaaaagaagccgaaattgttgctcaagcgggtcgtactggcgccgtg
acgattgcgactaacatggcgggtcgtggtaccgacatcgtgttaggtggcaactggaat
atggaaatcgaagccctcgagaatccaacagcagagcaaaaagctaaaatcaaggctgac
tggcaagagcgccacgatgccgtggtcgccgctggtggtttacacatcttaggtactgag
cgccacgaatctcgccgtatcgataaccagctacgtggtcgtgcgggtcgtcaaggtgac
gcgggttcttcacgtttctacctttctatggaagatagcttaatgcgcatcttcgcctcg
gatcgtgtctctggcatgatgaagaaactgggcatggaagaaggcgaagcaatcgagcat
ccatgggtttcccgtgcgattgaaaatgctcagcgtaaagtggaagcgcgtaactttgat
attcgtaagcaactgctcgaatttgacgacgtcgcaaacgaccaacgtcaagtggtttac
gcacagcgtaacgagttgatggatgccgaaagtatcgaagacaccatcaagaacatccaa
gacgatgtgatcagtgcggtgatcgatcaatacattccacctcaatcagtggaagagtta
tgggatgtgccaggattagagcaacgtttacagcaagaatttatgctaaaactgccaatc
caagaatggctagataaagaagacgacttacacgaagaaacattgcgtgagcgtatcatc
acttcttggtctgatgcgtataaagcaaaagaagaaatggtcggtgcaccagtactgcgc
cagtttgaaaaagccgtgatgctacaaaccctcgatggtctatggaaagaacacttagcg
gcaatggatcacttacgccaaggtatccacttacgtggttacgcgcagaagaatccaaag
caagaatataagcgcgagtctttcgagctgttccagcaattactgtcgaccttaaagcat
gacgtcattagtgtgctatctaaggtacaagtacaagcacagtcagacgtagaagagatg
gaagctcgtcgtcgtgaagaagatgccaagatccaacgcgactatcagcacgcagctgcc
gaagccttagtaggtggggatgatggtagcgacgagatgatggctcacacgccaatgatc
cgcgatggcgataaagtgggtcgtaacgatccttgtccttgtggctcaggccgtaagtat
aagcagtgtcacggcaagctaagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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