KEGG   Shewanella sp. WE21: CKQ84_04405
Entry
CKQ84_04405       CDS       T05404                                 
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
  KO
K05365  penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
Organism
shew  Shewanella sp. WE21
Pathway
shew00550  Peptidoglycan biosynthesis
shew01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:shew00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CKQ84_04405 (mrcB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:shew01003]
    CKQ84_04405 (mrcB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:shew01011]
    CKQ84_04405 (mrcB)
Enzymes [BR:shew01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     CKQ84_04405 (mrcB)
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     CKQ84_04405 (mrcB)
Glycosyltransferases [BR:shew01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   CKQ84_04405 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:shew01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   CKQ84_04405 (mrcB)
SSDB
Motif
Pfam: Transgly UB2H Transpeptidase
Other DBs
NCBI-ProteinID: AVI68627
UniProt: A0A2R3F111
Position
complement(1034655..1036955)
AA seq 766 aa
MTTKTTKKSPASRRANHGRGLFRRIWSISWKLGLAGLAVVTFYSIYLDQIIAQKFEGQKW
HLPAQVFSRSMALYPGAAVSHPQMMAELKLLGYRKVANPRQVGEFSASSTRIELWRRPFL
HPEGDQVEQRVMISFDSNGISSVTRVSDKRQLAVFHLEPVLLDRIITGDGEDRLFVPTEE
MPKSIVQALLLVEDRSFYEHHGVNPFAIARAAFVNISAGRTVQGGSTLTQQLAKNFFLSS
ERSLLRKVREALMAVIIDFRYSKDEILEAYLNEVYMGQDKSRAVHGMGLASRFYFGRPIS
ELTISQQAFLVAAIKGPSYYNPWKYPDRIQERRDLVLRLLMDAGDLTTAEYKVAVESPLG
IRNLNKPAHQKLPSFFALVKQEVNERYGDALLKQSGVKIYTTLDPMAQEAAEIAVTQTLK
SLDKSNKSLQIGMVVTDKYTGGIAAMVGDKTPGFDGFNRAVEIRRPIGSLIKPFVYATAL
APNSQFTLATPLKDQPITLKSEQGKTWSPQNFDKKFSGQVPLLTALKKSMNVPTVNLGIA
VGVDAVATTLAKSGWQEPLNEYPSMLLGAVNGSPLMVAQVYQTLADSGVYRKLTTVTAVL
DSDKNPLPVTRLPKEQAIAPETDFLIQFAMQQVVNTGTATRLGNAFPGVGLAGKTGTSND
SRDSWFAGFDERNVAAIWVGRDDNGKTSLYGSSGAMAVYLAFLKERPPISLRSIPVNGVV
KGFFDRDTGVAKESTCSNVDALPALAATYRPVNNCGDPLQWWQKIF
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgacaactaagacgacaaaaaaatcacccgcttcccgtcgggctaatcatggccgcggt
ttatttcgacgaatttggtctatcagttggaaattaggcttggctggattagctgtagtg
actttttacagtatttatcttgatcaaattattgcgcaaaaatttgaaggccaaaaatgg
catttgcccgcgcaggtgtttagccgctctatggcgctgtaccccggtgcggcagtcagc
catccacaaatgatggctgagcttaagttgctcggctatcgcaaagtcgctaacccacgc
caagtgggagagttttcggcatcgagcactcgtattgaattgtggcgtcgaccgtttttg
catcctgaaggcgatcaagtcgaacaaagagtcatgatcagcttcgacagcaatggcatc
agttcggtcactcgagtctcagacaagcgtcaactcgccgtattccaccttgagcctgta
ttgctcgaccgtattattactggcgatggtgaagacaggctgtttgtgccgaccgaagaa
atgccaaagtcgatcgtgcaggcgttactgctggtggaagatcgtagtttttatgaacac
catggtgtgaatcccttcgcgattgcgcgcgcggcttttgtgaacatcagcgccggtcgc
actgtgcaaggtggctcgacgttaactcagcagttagcgaaaaactttttcctttcgagt
gagcgttccttgctgcgtaaggtgcgcgaagccttaatggcggtcattattgattttcgt
tatagcaaagacgaaatcctcgaagcgtatcttaacgaagtgtatatggggcaggataaa
tcccgcgccgtccatggtatgggtttggcctcacgtttctatttcggccgtcctatcagt
gagttgactatttcccagcaggcattcttagtggctgcgattaagggaccgtcttactac
aatccatggaaatatccggatcgtattcaagaacgccgtgatctagtattgcgcttactc
atggatgcgggggatttaaccacggctgagtacaaggtggcggtagagtcacccttaggg
atccgtaatctcaataaaccagcacaccagaaattgccgtccttcttcgctctggtaaaa
caggaagtgaacgagcgttatggcgatgcgctattaaagcaatctggggtgaaaatctat
accacgctcgatcctatggcccaagaagccgccgaaattgcggtgactcaaaccctcaag
agtttagataagagcaataaatcattgcagattggtatggtcgtgaccgacaaatacacg
ggcggtattgcggctatggtcggcgataaaaccccaggatttgatggctttaaccgcgcg
gttgaaattcgtcgtcctattggctcgttaattaagccttttgtgtatgctacggctttg
gcacctaatagccaatttaccttagcgacacctcttaaagatcagcctattaccttaaaa
agcgagcaaggtaagacatggtcaccacaaaactttgataagaagttcagtggtcaggtg
cctttgttaacggcattgaaaaagtcgatgaacgtaccgacggtaaaccttgggattgct
gtgggtgtggatgcggtcgcaacaacattggctaaatcgggttggcaggagccgttaaac
gagtatccctccatgttactcggcgccgtcaatggctcgccattaatggtagcgcaagtg
taccaaaccttagctgatagcggtgtttatcgtaagttaaccacagtgaccgctgtgcta
gattctgataagaacccattgccagtgacgcgattgcctaaagagcaagctatagcacct
gagacagatttcttaattcaatttgctatgcagcaagtagtgaatacgggaacggcaacg
cgtttaggtaatgccttccctggcgttggacttgcgggtaagactggcaccagtaacgac
agccgcgactcttggtttgcgggcttcgatgagcgtaatgtcgccgccatttgggttggt
cgtgacgataacggcaaaaccagtttgtatggtagcagtggtgccatggccgtgtatctt
gccttcttaaaggaacgtccacctattagtctgcgctcaatccctgtgaacggcgtagtg
aagggcttttttgaccgagatacaggtgttgctaaggaatccacttgcagcaatgtcgat
gcgcttcctgcattagctgcgacctatcgtccagtgaataactgcggcgaccctttgcag
tggtggcagaaaattttctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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