KEGG T00389: Shewmr7

Shewanella sp. MR-7: Shewmr7_2205

Entry

Shewmr7_2205 CDS T00389

Gene name

ddl

Definition

D-alanyl-alanine synthetase A (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

shm Shewanella sp. MR-7

Pathway

shm00473	D-Alanine metabolism
shm00550	Peptidoglycan biosynthesis
shm01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:shm00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:shm00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp RimK

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2610390..2611400

AA seq 336 aa
MSKINLLLLCGGGSAEHDISLLSANYFETSLAKSEQVNVLRVVLDKFGQYQTAAGDDCEL
TNNREIRFRDETKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNQYDDEAIAQTQAALENWGSIFVKAASQGSSVGCYKVDDS
SKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYQGEVVATLPGEIICDSNTFYTFDEK
YAKSSKARTDVVAQNVPADISDQIRAYAIKAFKGMKLRHLSRIDFFLTQDNEILLNEINT
FPGSTPISMFPKMLQNHGHDFTEYLSLVIKGQLAAK

NT seq 1011 nt +upstreamnt +downstreamnt
atgtcaaaaatcaatttacttttgctgtgcggcggtggaagtgcggaacacgatatttcc
ctactgtcggctaattattttgaaacctcattagcaaaatccgagcaggttaatgtactg
cgcgtggtactggacaagtttggccaataccaaaccgccgcgggggatgactgtgagctg
accaataaccgtgaaattcgcttccgtgatgagactaaggcgccttggcctgtggattat
gtgatcccctgtattcacggctatccgggcgagacaggtgacattcagtcttacttcaat
cttatccaactgccctactttggttgcgaatccgaagccagcagcaactgctttaacaag
atcaccgctaagatgtggtttagtgccttaggcattcctaacacaccttatatcttctta
aatcaatatgatgatgaagcgattgcccaaacccaagccgcgctggaaaattggggttcg
attttcgtcaaggccgcatctcaaggttcttctgtgggttgctataaagtcgatgacagc
agcaaagtcgcaggcgtgttaaaagatgcctttggctatgcgccctatgtgattgtcgaa
aaaaccattaaagcccgtgagcttgaagtcgccgtttatgagtatcaaggcgaagtggtt
gcgaccctgccgggcgaaatcatctgcgatagcaataccttctacaccttcgatgaaaaa
tacgccaagagtagtaaggcccgcaccgatgtggtcgcgcaaaatgtgcccgctgacatc
agcgatcaaatccgcgcctatgcaattaaagcctttaagggcatgaagcttcgccatctg
tcacgcatcgactttttcttaacccaagataatgaaatcctgctcaacgaaatcaatacc
ttcccgggttcgacgccgatttcgatgttccctaagatgttgcaaaaccatgggcatgat
tttaccgaatacttaagtttggtgattaaaggccagttagcggctaagtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SHM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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