KEGG   Shewanella sp. MR-7: Shewmr7_2205
Entry
Shewmr7_2205      CDS       T00389                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
shm  Shewanella sp. MR-7
Pathway
shm00470  D-Amino acid metabolism
shm00550  Peptidoglycan biosynthesis
shm01100  Metabolic pathways
shm01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:shm00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Shewmr7_2205
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Shewmr7_2205
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Shewmr7_2205
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:shm01011]
    Shewmr7_2205
Enzymes [BR:shm01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Shewmr7_2205
Peptidoglycan biosynthesis and degradation proteins [BR:shm01011]
 Precursor biosynthesis
  Amino acid ligase
   Shewmr7_2205
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp RimK CPSase_L_D2
Other DBs
NCBI-ProteinID: ABI43193
UniProt: Q0HUL2
Position
2610390..2611400
AA seq 336 aa
MSKINLLLLCGGGSAEHDISLLSANYFETSLAKSEQVNVLRVVLDKFGQYQTAAGDDCEL
TNNREIRFRDETKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNQYDDEAIAQTQAALENWGSIFVKAASQGSSVGCYKVDDS
SKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYQGEVVATLPGEIICDSNTFYTFDEK
YAKSSKARTDVVAQNVPADISDQIRAYAIKAFKGMKLRHLSRIDFFLTQDNEILLNEINT
FPGSTPISMFPKMLQNHGHDFTEYLSLVIKGQLAAK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgtcaaaaatcaatttacttttgctgtgcggcggtggaagtgcggaacacgatatttcc
ctactgtcggctaattattttgaaacctcattagcaaaatccgagcaggttaatgtactg
cgcgtggtactggacaagtttggccaataccaaaccgccgcgggggatgactgtgagctg
accaataaccgtgaaattcgcttccgtgatgagactaaggcgccttggcctgtggattat
gtgatcccctgtattcacggctatccgggcgagacaggtgacattcagtcttacttcaat
cttatccaactgccctactttggttgcgaatccgaagccagcagcaactgctttaacaag
atcaccgctaagatgtggtttagtgccttaggcattcctaacacaccttatatcttctta
aatcaatatgatgatgaagcgattgcccaaacccaagccgcgctggaaaattggggttcg
attttcgtcaaggccgcatctcaaggttcttctgtgggttgctataaagtcgatgacagc
agcaaagtcgcaggcgtgttaaaagatgcctttggctatgcgccctatgtgattgtcgaa
aaaaccattaaagcccgtgagcttgaagtcgccgtttatgagtatcaaggcgaagtggtt
gcgaccctgccgggcgaaatcatctgcgatagcaataccttctacaccttcgatgaaaaa
tacgccaagagtagtaaggcccgcaccgatgtggtcgcgcaaaatgtgcccgctgacatc
agcgatcaaatccgcgcctatgcaattaaagcctttaagggcatgaagcttcgccatctg
tcacgcatcgactttttcttaacccaagataatgaaatcctgctcaacgaaatcaatacc
ttcccgggttcgacgccgatttcgatgttccctaagatgttgcaaaaccatgggcatgat
tttaccgaatacttaagtttggtgattaaaggccagttagcggctaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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