KEGG   Shewanella sp. MR-7: Shewmr7_3129
Entry
Shewmr7_3129      CDS       T00389                                 
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
shm  Shewanella sp. MR-7
Pathway
shm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Shewmr7_3129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shm03400]
    Shewmr7_3129
Enzymes [BR:shm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Shewmr7_3129
DNA repair and recombination proteins [BR:shm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Shewmr7_3129
 Prokaryotic type
     Shewmr7_3129
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABI44113
UniProt: Q0HRZ2
Position
complement(3707501..3708160)
AA seq 219 aa
MATWQAFIDHQRSQPYYQQLIAFVNQERELGKVIYPPKEDVYNAFKTTPLEQVRVVLIGQ
DPYHGPDQAHGLCFSVKRGIKPPPSLANMYKELVNDIPGFQIPNHGDLTQWAEQGILMLN
TVLTVEQGQAHSHANAGWETFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHHIL
SGPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQWQV
NT seq 660 nt   +upstreamnt  +downstreamnt
ttggcgacttggcaggcatttattgaccatcaacgttctcaaccctattaccagcagttg
atagcatttgtgaatcaagagcgtgaattgggtaaggtgatctatcctcctaaagaggat
gtgtataacgcctttaaaacaaccccattggagcaagtgcgtgtagtgcttataggtcaa
gatccctaccatggccccgaccaagcccacggcctgtgtttctcggttaagcgaggcatt
aaaccgccgccatcgctggccaatatgtacaaagagttagtgaacgatattcccggtttc
caaatccctaaccatggtgatttaacccagtgggcggagcaggggatcttgatgctcaat
accgtgctgacggtggagcaagggcaagcccactcccatgctaatgcaggctgggaaacc
tttaccactgaggcgttaaagctgcttaatgcgcaggagcggccgattattttcgtactc
tggggcagccatgccatcaaaaaaggggcggtgattactgcgccgcagcatcacattctg
tcgggcccccacccgtcaccgctgtcggcctatcgcggcttcttcggttgtgggcatttt
tctaaagtgaatcaactgctaatggcgcggggtgaggcaccgatccaatggcaggtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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