KEGG   Streptomyces hygroscopicus subsp. jinggangensis TL01: SHJGH_3048
Entry
SHJGH_3048        CDS       T02531                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sho  Streptomyces hygroscopicus subsp. jinggangensis TL01
Pathway
sho03030  DNA replication
sho03430  Mismatch repair
sho03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SHJGH_3048
   03430 Mismatch repair
    SHJGH_3048
   03440 Homologous recombination
    SHJGH_3048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sho03032]
    SHJGH_3048
   03400 DNA repair and recombination proteins [BR:sho03400]
    SHJGH_3048
Enzymes [BR:sho01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SHJGH_3048
DNA replication proteins [BR:sho03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SHJGH_3048
DNA repair and recombination proteins [BR:sho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SHJGH_3048
SSDB
Motif
Pfam: RNase_T BRCT Rv2179c-like RNase_H_2 HisKA_3 PTCB-BRCT DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AGF62714
Position
3534909..3535868
AA seq 319 aa
MSSPTQWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTLVNPERDPG
PVWIHGLTSETLAGAPLFADIAEEFAARLEGRVLVAHNAVFDWQMIAREYARVRREAPVR
QRLCTIALSKELALPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPSLRAAAAGG
VRLPLLECRPLTEWSDRPVPRQASGGYGGYRAGGWRPSRKRPACPYPNPGRYEDGKRLKQ
GMRVAFSGDTSTERELLEDRAVEAGLHVATSISRLTSLLVTNDPDSGTSKTVKARQYGTP
IVDEAAFGQLLGDVEPADE
NT seq 960 nt   +upstreamnt  +downstreamnt
gtgtcctcccccacccagtggccggccgcgtatccgcagggatacgcggtcgttgacgtg
gagaccaccggcctggcccgggacgaccggatcatctccgctgccgtctaccggctggac
gcgcgcggtgaggtggaggaccactggtacacgctggtcaacccggagcgggacccgggc
ccggtgtggatacacggtctgacgagcgagacgctggccggcgcgcccctgttcgcggac
atcgccgaggagttcgccgcccggctggagggccgggtgctcgtcgcgcacaacgccgtc
ttcgactggcagatgatcgcgcgggagtacgcgcgcgtgcggcgcgaggcgccggtgcgg
cagcggctgtgcaccatcgcgctgtcgaaggagctggcgctgccgctgcccaaccacaag
ctggagtcgctggcggcgcacttcggggtcgtgcagcagcgggcgcaccacgcgctggac
gacgcgcgcgtgctggcggaggcgttccggcccagcctgcgggccgcggcggcgggcggc
gtacggctgccgctgctggagtgccggccgctgacggagtggtcggaccggcccgtgccc
cggcaggcgtcgggtggctacggcggctaccgggccggcggttggcgcccgtcccgcaaa
aggcccgcatgcccctatcccaacccagggcgctacgaagacggcaaacgcctcaaacag
ggcatgcgggtggccttctccggcgacacctcgaccgagcgcgagctgctggaggaccgg
gccgtggaggccgggctgcacgtcgccaccagcatctcccggctgaccagcctgctggtg
accaacgaccccgactcgggcacgtcgaagacggtgaaggcccgccagtacggcacgccg
atcgtggacgaggccgcgttcgggcagctgctgggggatgtcgagcccgccgacgagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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