KEGG   Sarcophilus harrisii (Tasmanian devil): 100918574
Entry
100918574         CDS       T02286                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X2
  KO
K10031  C-X-C motif chemokine 12
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04060  Cytokine-cytokine receptor interaction
shr04061  Viral protein interaction with cytokine and cytokine receptor
shr04062  Chemokine signaling pathway
shr04064  NF-kappa B signaling pathway
shr04360  Axon guidance
shr04670  Leukocyte transendothelial migration
shr04672  Intestinal immune network for IgA production
shr04810  Regulation of actin cytoskeleton
shr05163  Human cytomegalovirus infection
shr05200  Pathways in cancer
shr05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100918574 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100918574 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100918574 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100918574 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100918574 (CXCL12)
   04672 Intestinal immune network for IgA production
    100918574 (CXCL12)
   04062 Chemokine signaling pathway
    100918574 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    100918574 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100918574 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    100918574 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    100918574 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:shr04052]
    100918574 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:shr00536]
    100918574 (CXCL12)
Cytokines and neuropeptides [BR:shr04052]
 Cytokines
  Chemokines
   100918574 (CXCL12)
Glycosaminoglycan binding proteins [BR:shr00536]
 Heparan sulfate / Heparin
  Chemokines
   100918574 (CXCL12)
SSDB
Motif
Pfam: IL8 CXCL16
Other DBs
NCBI-GeneID: 100918574
NCBI-ProteinID: XP_003755004
UniProt: A0A7N4P2D5
Position
2:complement(621348926..621370808)
AA seq 93 aa
MDVKVVALVTLLVATLALSEGKPVSLSYRCPCRFTESNVAKANIKHLKILNTPNCALQIV
ARLKSSSRQVCIDPKLKWIQEYLEKAFNKRFKM
NT seq 282 nt   +upstreamnt  +downstreamnt
atggacgtgaaagtggtcgccctggtgaccttgctggtggcaactcttgcgctctccgag
ggaaaaccggtcagtctgagttacagatgtccctgcagattcactgagagcaacgtagcc
aaagccaacatcaagcatctcaaaatcctcaacacacctaactgtgctctccagatcgtg
gcaaggctgaagagtagcagcagacaagtatgcattgatcctaaattaaaatggattcaa
gaatacctggagaaagctttcaacaagaggttcaagatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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