KEGG   Sarcophilus harrisii (Tasmanian devil): 100922987
Entry
100922987         CDS       T02286                                 
Name
(RefSeq) chloride channel protein ClC-Ka isoform X1
  KO
K05017  chloride channel Ka
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:shr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:shr04040]
    100922987
Ion channels [BR:shr04040]
 Chloride channels
  Chloride channel (CLC)
   100922987
SSDB
Motif
Pfam: Voltage_CLC CBS Flavi_NS4A
Other DBs
NCBI-GeneID: 100922987
NCBI-ProteinID: XP_031818655
Ensembl: ENSSHAG00000001076
Position
3:complement(567779275..567800364)
AA seq 688 aa
MEDLVGLHEGAAGEPVALQELWGPCPRTQHRIRGFLERVKRQLFRVGEDWYFLVGLGVLM
AIISFTMNFAVSRVVHAHMWLYREIGNNHLLRYLSWTVYPIALVSFSTGFSQSITPFSGG
SGISELKVILSGVVLEDYLDIKNFGAKVVGLTCTLACGSTIFLGKVGPFTHICCMIASYM
GKVRISALGEYENKIKQNELLVAAAAVGVATVFGAPFSGVLFSIEVMSSHFAVWDYWRGF
FSAVCGAFMFRLLAVFNSEQETITSLFKTRFRVDIPFDLPEIFFFVLLGFVCGIMSCAYL
FGHRRFVMFVRTNCITKNLLATDKPLYAALVALILASITYPHSLGRFMASRLSMNLYLNS
LFDNQSWALLSRNSSPEWPPEVDPNNLWFEWYHPQFTIFGTLTFFLVMKFWMLILATTIP
MPAGYFMPVFIYGAAMGRIFGEILAVIFPEGIKTDDGVVNTILPGAYAVAGAAAFSGAVT
HTISTALLVFELTGQFVHVLPVLMAVLAANAVCQNFQPSFYDNGIILKKLPYLPRVVGRK
LNSHWVTAELFMNPNITTLAKDSPLDEVVKTVTSTEAAEFPLVESEESQILVGIIQRAQL
LPFLQAEPSIQTPGHQWRLQDVLSGGCPVEPVTLQLSPQTSLHQVHHLFELLKMRRILVT
SMGRVVGFISWVELKKAIADLANPPAPK
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggaggatctggtgggactccatgagggcgcagcgggggaacccgtggccttgcaggag
ctctggggcccctgccccaggacccagcaccgaatccgaggtttcctggagagagtgaag
aggcagctcttccgggtgggcgaagactggtatttcttggtcggcctaggagtcctcatg
gctatcatcagcttcaccatgaactttgctgtttccagggtcgtccatgcacacatgtgg
ctgtatcgagaaatcggcaacaaccaccttctccgctacctctcttggactgtgtatccc
atagccctggtctccttctccactggcttttcccagagcatcacccctttttctggaggc
tccggaatctcagaactgaaggtcattttatctggtgtagtcctggaagattacttagac
attaagaactttggggccaaagttgtgggcctcacctgtaccctggcatgtggcagcacc
atctttcttggcaaagtgggccccttcacacatatttgctgcatgattgcctcctacatg
ggcaaggtgcgcatttcagccctcggcgagtatgagaacaagatcaagcagaatgagctg
ttggtggcggcagcagcagtgggggtggccactgtctttggggcacccttcagtggggtc
ctgttcagcatcgaggtcatgtcctcccacttcgctgtctgggattactggaggggcttt
ttctctgcggtctgcggggccttcatgttccggctcttggctgtcttcaacagtgaacaa
gagaccatcacctccctcttcaagactagattccgagtagatataccttttgacctacca
gaaatcttcttttttgtactgcttgggtttgtctgcgggatcatgagctgtgcctacctc
ttcggccatcgtcgatttgtgatgttcgttcgaacaaactgcatcaccaaaaatctgctt
gcaacagacaagcctctgtacgcagccctggtggcactaattctggcctccatcacctat
ccacacagcctggggcgatttatggcttctaggctgtctatgaatttgtacctgaattca
ctgtttgacaaccagtcttgggctctgctatcccggaactcctctcctgagtggccacca
gaggtagaccccaacaacctttggtttgaatggtaccacccccagtttaccatttttggc
accctcaccttcttcctggtcatgaagttttggatgctgattctcgccaccacaatacct
atgccagccggatacttcatgcccgtatttatctatggagctgccatgggacgaattttt
ggagagatcctggcggtcatcttcccagagggcatcaagaccgatgatggggtcgtcaac
accatcctccctggtgcctatgccgtggcaggagctgctgctttctcgggagcggtgacc
cacacgatttccacggccctgctggtcttcgagctgacgggccagtttgtccatgtgtta
cccgtgctgatggctgtgctcgcagccaatgctgtgtgccagaacttccagccctccttc
tacgacaatggcatcatcctgaagaagcttccctacctgccccgggtcgtagggcgcaaa
ctcaactcccactgggtgactgccgaactcttcatgaaccccaatatcaccaccctggct
aaagactctcccctggatgaagtggtcaaaactgtgacctccacagaagctgctgaattc
ccactggtggagagtgaagaatcccagatcttggtgggcataatccagagagcccagctg
ttgccattcctccaagcagagccaagcatccagacacccggacaccagtggcgtctccag
gatgtcctgtctgggggctgtcccgtggagcctgtgaccctacagctgtcacctcagaca
tctctgcaccaggttcatcacctctttgaactcttgaaaatgcggagaatcttggtgacg
tcgatgggtcgagtggtgggcttcatctcctgggtggagttgaagaaggccattgctgac
ctggcaaaccctccggctcctaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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