KEGG   Sarcophilus harrisii (Tasmanian devil): 100927072
Entry
100927072         CDS       T02286                                 
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
  KO
K04638  intraflagellar transport protein 57
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05016  Huntington disease
shr05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:shr00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100927072 (IFT57)
   05022 Pathways of neurodegeneration - multiple diseases
    100927072 (IFT57)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:shr03037]
    100927072 (IFT57)
Cilium and associated proteins [BR:shr03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   100927072 (IFT57)
SSDB
Motif
Pfam: IFT57 MCPsignal Mod_r COG3_N
Other DBs
NCBI-GeneID: 100927072
NCBI-ProteinID: XP_003763614
Ensembl: ENSSHAG00000012976
UniProt: G3WIG2
Position
3:complement(287018982..287094739)
AA seq 429 aa
MAAAVVSPVGVEETVIRGRGGDAAGEGLYVERGPGAAYHMFVVMEDLVEKLKLLRYEEEI
LRRNNLKPLSRHYFALPTNPGEQFYMFCTLAAWLINKAGCPFEQPQEYDDPNATISNILS
ELRSFGRSADFPPSKLKSGHGEHVCYVLDCLAEEALKYVGFSWKRPVYPVEELEEETVPE
DDAELTVNKVEEEIVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAEWN
LEVERVLPQLKVTIRTDNKDWRIHVDQMHQHKSEIESALKETKGFLDKLHNEISRTLEKI
SSREKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRILSEITEELEKVKLEM
EEKGSSMTDGAPLVKIKQSLTKLKQETVQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATI
IPESAIGSY
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggctgcggcagtggtgtcgccggtaggtgtggaggagacggtgattcggggccgcggc
ggggacgcggccggggagggcttgtacgtggagcggggccctggtgcggcctaccacatg
tttgtggtgatggaagacctggtggagaagctgaagctgctgcgctacgaagaggagatc
ctgcgcagaaacaacctgaagcccctgtccagacattactttgctttgcctaccaaccca
ggtgaacagttttacatgttctgcactcttgctgcttggctaattaataaagcaggatgc
ccctttgaacaaccacaggaatatgatgaccccaatgcaacaatatctaatatattatct
gaacttcgatcatttgggagatctgcagattttcctccatcaaaattaaagtcaggtcat
ggagaacatgtgtgttatgtgcttgattgtttagctgaagaagctctaaaatatgttggt
ttcagttggaaaaggccagtatacccagtagaagaattagaagaagaaacagttccagaa
gatgatgcagaattgacagtaaataaagtagaggaggaaattgtggaagaggagactgat
aatgaagaaaactttattgatctcaatgttttaaaggcacaaacctaccgattggatatg
aacgagtctgccaaacaagaagatattttggaatcgacaacagatgctgcagaatggaat
ctagaagtggaacgtgtactaccacaactgaaagtcacgattcggactgataataaggac
tggagaatccatgttgaccaaatgcatcaacacaaaagtgaaattgaatctgctttaaaa
gagacaaagggatttttggacaaactccataatgagatcagtaggaccctggaaaagatc
agcagtcgagaaaaatacatcaacaatcagcttgagcacttggttcaagagtatcgtgct
gctcaggcccagctgagtgaggcaagggaaagataccagcagggaaatggaggagtaact
gaaagaactagaattctttccgagattacagaagaattagaaaaggtaaagttggaaatg
gaagaaaagggcagcagcatgactgatggtgctcctttggtaaagattaaacagagctta
accaaactgaagcaagaaacagtccaaatggacattagaattggtgtagtggaacacaca
ttactccagtcaaaactaaaggagaagtcaaatatgactagggatatgcatgcaacaatc
attccagaatctgcaataggttcttattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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