KEGG   Sarcophilus harrisii (Tasmanian devil): 100927509
Entry
100927509         CDS       T02286                                 
Symbol
FN1
Name
(RefSeq) fibronectin isoform X4
  KO
K05717  fibronectin 1
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04151  PI3K-Akt signaling pathway
shr04510  Focal adhesion
shr04512  ECM-receptor interaction
shr04810  Regulation of actin cytoskeleton
shr04820  Cytoskeleton in muscle cells
shr04933  AGE-RAGE signaling pathway in diabetic complications
shr05100  Bacterial invasion of epithelial cells
shr05135  Yersinia infection
shr05146  Amoebiasis
shr05165  Human papillomavirus infection
shr05200  Pathways in cancer
shr05205  Proteoglycans in cancer
shr05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100927509 (FN1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100927509 (FN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100927509 (FN1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100927509 (FN1)
   04810 Regulation of actin cytoskeleton
    100927509 (FN1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100927509 (FN1)
   05205 Proteoglycans in cancer
    100927509 (FN1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100927509 (FN1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100927509 (FN1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    100927509 (FN1)
   05100 Bacterial invasion of epithelial cells
    100927509 (FN1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100927509 (FN1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100927509 (FN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shr04131]
    100927509 (FN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shr04147]
    100927509 (FN1)
   00536 Glycosaminoglycan binding proteins [BR:shr00536]
    100927509 (FN1)
   04990 Domain-containing proteins not elsewhere classified [BR:shr04990]
    100927509 (FN1)
Membrane trafficking [BR:shr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    100927509 (FN1)
Exosome [BR:shr04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   100927509 (FN1)
Glycosaminoglycan binding proteins [BR:shr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100927509 (FN1)
Domain-containing proteins not elsewhere classified [BR:shr04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   100927509 (FN1)
SSDB
Motif
Pfam: fn3 fn1 Pur_ac_phosph_N fn2 NDNF Interfer-bind Arylsulfotran_N
Other DBs
NCBI-GeneID: 100927509
NCBI-ProteinID: XP_012401840
Ensembl: ENSSHAG00000009319
UniProt: G3W5V6
Position
3:67091818..67172178
AA seq 2392 aa
MHRDPVPGRRLLLLLLLALCVGTSVQEAKSKKTRRQTQQKVQPPSPVAVSQSKTGCYDNG
KHYQINQQWERIYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPK
DSMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGE
WTCKPVAERCYDNTGGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDT
KTSYRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHSSLQTTATGPGSVTDVRTALYQP
QPQPQPAPYGHCVTDSGVVYSLGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSN
GEPCVLPFTYNGRTYYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDQNVLVQTRGGNSN
GALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTINYDADQKFGFCPMAAHEEICTTNEGV
MYRIGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDGITYNVNDTFHKRHE
EGHMLNCTCFGQGRGRWKCDPIDQCQDSETRTFYQIGDSWEKYVHAVRYQCYCYGRGIGE
WHCQPLQTYPGTTGPVQVIITENPSQPNSHPIQWNAPEPSHISKYILRWKPKNSPNRWKE
AIIPGHLNSYTIKGLRPGVIYEGQLISVQHYGHKEVTRFDFTTTSTSPAVSTNTVTGETT
PFSPVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVN
IPDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPDHAVDKVDDTSIVIRWSRPQA
PITGYRIVYAPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESAPIFIQQ
ETTGVQRPDKVPPPKDLQFVEVTDVKVTIMWTPPESAVTGYRVDVVPVNLPGEHGQRLPV
SRNTFAEVTGLSPGVTYYFKVFAVNQEKESTPLTGEQTTKLDAPTNLRFVNETDTTVLVT
WTPPRARIAGYRLTVSPTRGNQPKQYNVGPSATQYPLRNLQPGSEYTASLVAVKGNQQSP
KQTGIFTTLQPASSIPHYNTEVTETTIIITWTPAPRIGFKLGVRPSQGGEAPREVTSESG
SIVVSGLTPGVEYIYSISVLQDGQEKDAPIVKKVVTPLSPPTNLHLDSNPDTGILTVSWE
RSTTPDISGYRITTTPTNGREGYSLEEVVHGDQSSCTFENLSPGLEYNVSVYTVKGDKES
VPISDTIIPAVPPPTDLRFTNVGPDTMRVTWAPPPSIELTNLLVRYSPVKNEEDVAELSI
SPSDNMVVLTNLLPGTEYLVSVSSVYEQHESIPLKGRQKTGLDSPTGIDFSDITANSFTV
HWMSPRAPNTGYRIRHHPEHASGRPREDRVPPSRNSITLTNLKPGTEYVISIVSVNGREE
SAPLVGQQSTVSDVPRDLEVIATTPTSLLIRWDAPAVTVRYYRITYGETGGNSPVQEFTV
PGTKSTATITGLKPGVDYTITVYAVTGRGDSPASSKPVTISYRTEIDKPSQMQVTDVQDN
SISVRWLPSNSPVTGYRVTTAPKNGPGPSKTKTTGPDQTEMTIEGLQPTVEYVVSVYAQN
QNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHEL
FPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQPLIGIQSTAIPSPTNLKFTQVTPT
SLTAQWTAPNVQLTGYRVRVTPKEKTGPMKEINLSPDSTSVVVSGLMVSTKYEVSVYALK
DTLTSRPAQGVVTTLENVSPPRRARVTDATETTITLNWRTKTETITGFQIDAIPSNGQSP
VQRTINPEIRSYTITGLQPGTDYKIHLYTLNDNARSSPVVIDASTAIDAPSNLRFLTTTP
NSLLVSWQPPRARITGYIIKYEKPGSPSREVVPRPRPGVTEATITGLEPDTEYTIYVIAL
KNNQKSEPLMGRKKTDELPQLVTLPHPNGPEILDVPSTVQKTPFITNPGYDNGNGIQLPG
TTGQQPSVGQQMIFEEHGFRRTTPPTAATPIRHRPRPYPPNVDEEIQIANIPRGDADHLP
YPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISCHPIGIDEEPLQFRVPGTSASAT
LTGLTRGATYNIIVEALKNQRRHKVREEMITVGNSVNEGLNQPTDDTCFDPFTVTHYSIG
EEWERLSDSGFKLWCQCLGFGSGHFRCDSSKWCHDNGVNYKIGDKWDRQGENGQMMSCTC
LGNGKGEFKCDPHEATCYDDGKTYHVGEQWQKEYLGAICSCTCFGGQQGWRCDNCRRPGV
ETAPEGSAGHSYSQYSQRYHQRTNTNVNCPIECFMPLDVQADTENSRDSLEK
NT seq 7179 nt   +upstreamnt  +downstreamnt
atgcacagggacccagtcccgggacggcggctgctgctgctactgctacttgcactatgt
gtgggaacatcagtgcaagaggcaaagtcgaagaaaacccggaggcaaactcagcaaaag
gttcagcctccgtcccccgtggctgtcagccaaagcaaaaccggctgttatgataatgga
aaacactatcagatcaatcaacaatgggaacgaatttatctgggcaatgcactggtttgt
acctgctatggaggcagcagaggttttaactgtgagagcaaacctgaacctgaagaaaca
tgctttgacaaatatactggaaacacctaccgggttggggacacttatgagcgcccaaag
gattcaatgatttgggattgtacttgcattggcgctggccgagggagaatcagctgtacc
attgcaaatagatgtcatgaaggaggccagtcatacaaaataggtgatacctggcgccgc
ccacatgagactggaggctacatgcttgagtgcgtttgtcttgggaatggaaaaggagaa
tggacctgcaaacctgtagctgaaaggtgctatgataacactggtggaacttcctatgtt
gttggagagacttgggaaaagccctatcaaggctggatgatggtggattgtacctgttta
ggagaaggcagtggacgtatcacatgtacctctagaaatagatgtaatgatcaggacacc
aagacatcctatcgaattggagacacctggagcaagaaagacaatcgtggaaatttgctt
cagtgtatctgcactggtaatgggaggggagaatggaaatgtgaaagacattcatcttta
caaacaactgctacagggcctggctctgtcacagatgttcggacagcactgtaccagcct
cagcctcagcctcagcctgctccatatggtcattgtgtcactgatagtggtgtggtctac
tctctgggaatgcagtggctcaagacccaaggaaacaaacagatgttatgcacatgtctg
ggcaatggtgtcagctgccaggaaaccgctgtaactcaaacctatggtggcaattccaat
ggagaaccatgtgtcttgccattcacatacaatggcaggacttactattcttgtacaact
gaaggtcgtcaggatgggcatctttggtgtagtaccacttcaaattatgaacaagaccag
aaatattctttctgtacagaccagaatgttctggttcagactcgaggtggcaattccaat
ggtgccttgtgtcacttcccattcttgtacaacaaccgtaattacaccgactgtacttca
gagggaaggcgagacaacatgaaatggtgtggaaccaccatcaactacgatgctgatcag
aaatttggattctgtcctatggctgctcatgaagagatctgcactaccaatgagggggtc
atgtatcgcattggagatcagtgggacaaacagcatgatatgggacatatgatgaggtgc
acatgtgtaggaaatggtcgaggggaatggacctgtgtggcgtattcacagctcagagat
cagtgtattgtcgatggtattacatataatgtgaatgatacattccataagcgtcatgaa
gaaggtcatatgctgaactgcacatgttttggccagggccgtggaaggtggaaatgtgat
cccattgaccaatgccaggattcagaaacccgtacattctaccagattggagattcatgg
gagaaatacgttcatgctgttagatatcaatgctactgttatggccggggaattggagaa
tggcactgccaacccttacagacctatccaggcacaactggtccagtccaagtaatcatc
actgaaaaccctagtcagcccaattctcatcctatccagtggaatgcacctgaaccatct
cacatttccaagtacattctcagatggaagcctaaaaattctccaaatcgctggaaagag
gctattattcctggtcatttaaattcttacacaatcaaaggtctacggcctggtgtgatt
tatgagggacagcttatcagtgtacaacactatggacacaaggaagtcactcgttttgac
ttcactaccactagcaccagccctgctgtgtccaccaacacagtcacaggagagacaaca
ccattttctcctgttgttgcgacttcggaatctgttacggaaattacagccagcagcttt
gtggtctcatgggtctcagcctctgacactgtctctggattccgggtggaatatgaactg
agcgaggaaggtgatgagccacagtaccttgatcttccaagcacagccacttctgttaac
attcctgacttgcttcctggacgcaaatatattgtaaatgtctatcagatctctgaagaa
ggagaacaaaatctgatcctgtctacctcacagacaacagcacctgatgctcctcctgac
catgcagtggacaaagtagatgacacctcaattgtcattcgctggagcagaccacaggcc
cccatcacaggttacagaattgtctatgccccatcagttgaaggaagcagcacagagctc
aatctcccagaaactgctaattctgtaactcttagtgacttgcaacctggggttcaatat
aacatcactatttatgctgtggaagaaaatcaagaaagtgcccccatcttcattcagcaa
gaaaccactggagttcagcgtccagacaaagttcctcctcctaaggatctgcagtttgtg
gaagtgacagatgtcaaagtcaccatcatgtggaccccccctgaaagtgcagtgactggc
taccgggtggatgtggtccctgtcaatcttcctggggagcatgggcagaggctgccagtc
agcaggaatacttttgctgaggtcactgggctctcccctggagttacctattacttcaag
gtctttgcagtgaaccaggaaaaagagagcactccattgacaggagaacagaccactaaa
ctggatgctcctactaacttaaggtttgtcaatgagactgacaccacagtcttggttacc
tggactccacctcgtgccaggatagcaggatatcgactgactgtgagtcctactagggga
aaccaacctaagcaatataatgtgggaccatctgccacccaatacccattgaggaatctg
caaccagggtctgagtacactgcttccctagtggctgtcaaaggcaatcaacagagtcct
aagcaaactggaatcttcactaccttgcaacctgccagttccattcctcattacaataca
gaagtgactgaaacaacgattatcatcacctggacaccagctccaagaatcggttttaag
ttgggtgtacgaccaagtcaaggtggagaagctcctcgtgaggtgacttcagagtctgga
agcattgttgtgtctggcctgactccaggagtggaatatatatattctatttctgtctta
caagatggtcaggagaaagatgctccaattgtaaagaaagtggttacaccactgtctcca
ccaaccaacctccacttggattcaaacccagacactggaatcctaactgtctcctgggaa
agaagcaccaccccagacatttctgggtatagaataaccacaacacctacaaatggccga
gagggttattctctggaagaagtggtccatggagatcagagttcctgcacttttgaaaat
ctgagtcctggcctggagtacaatgtcagtgtgtacactgtcaaaggtgacaaggaaagt
gtccccatctccgataccatcattccagctgtccctcctcccactgacctgagattcacc
aatgttggcccagacaccatgcgtgtgacatgggctccacccccatctattgaattgact
aacctattggtacgatattcacctgtgaaaaatgaggaagatgtcgcagagttgagcatt
tctccttcagataacatggtggttctaacaaatctccttcctggtactgagtacttggtc
agtgtttccagtgtttatgaacaacatgagagcatacctcttaaaggaagacagaaaaca
ggtcttgattccccaactggcattgacttttctgatataactgccaactccttcactgtc
cattggatgtctccacgggcccccaatactggctatagaattcgccaccatcctgaacat
gctagtggaagacctcgtgaagaccgggttcccccatcaagaaactccatcacacttact
aacctgaaaccaggcacagaatatgtgatcagcattgtatctgtcaacggcagagaggaa
agtgccccattggttggccaacagtcaacagtttctgatgttccaagggaccttgaagtg
attgctactacccccactagcctgcttattcgttgggatgcacctgcagttaccgtcaga
tattatagaatcacctatggtgaaacaggaggaaatagccctgtgcaggagttcactgtg
cctggaaccaaatctacagccaccatcaccggccttaaacctggagtagattataccatc
actgtgtatgcagtaaccggtcgtggagacagtccagccagcagcaaacccgtgaccatt
tcataccgaacagaaattgataaaccatcacaaatgcaagtgactgatgtgcaggacaac
agcatcagtgtgaggtggctaccttcaaattccccagtcactggttacagagtgaccact
gctcccaaaaatggccctggaccatctaaaacaaaaactactggcccagatcaaacagaa
atgaccattgaaggactgcagcccacagtggaatatgtagttagtgtctatgctcagaat
caaaatggagagagtcagcctctggtgcagactgcagtcactaacattgatcgccctaaa
ggactggcattcactgatgtggatgtcgattccatcaaaattgcttgggaaagcccacag
gggcaagtttccaggtatagggtgacctactcaagccctgaggatggaatccatgagcta
tttcctgcccctgatggtgaagaagatacagcagaactgcagggtctcaggcctgggtct
gagtacacagtcagtgttgttgccttgcacgatgatatggagagccagcccctgattgga
atccagtccacagctattccttcaccaaccaacctgaagttcactcaggttactccaacc
agcttgacagcacaatggacagcacccaatgttcaactcactggatacagagtgcgagtg
acacccaaggaaaagacaggaccaatgaaggaaatcaacctttctccagatagcacctca
gtggtggtatcaggactaatggtatcaactaaatatgaagtcagtgtctatgctcttaag
gatactctcaccagcaggccagcacagggtgtagttactactttggagaatgtcagtcct
ccacgtagagcccgtgtgacagatgctactgaaaccaccatcactctcaactggagaacc
aagacagaaactatcacaggtttccagattgatgctatcccctccaatggtcaaagccct
gtacagagaacaatcaaccctgaaatcagaagctataccattactggtttacaaccaggc
actgattataagatccacctctacactctaaatgacaatgcccgaagctcacctgtagtg
attgatgcttcaactgccattgatgcaccatccaacctgcggttcctcacaacaacacct
aactcactgcttgtttcatggcaaccaccccgagctcggatcactggctacatcatcaag
tatgagaagcctgggtcaccttcccgagaggtggtccctcgacctcgtcctggggtcaca
gaggccactatcactgggctggaaccagatactgagtataccatctatgtcattgccttg
aagaacaatcaaaagagtgaaccattgatgggaagaaaaaagacagatgagcttccccaa
ctggtaacccttccacaccctaatggaccagagatcttggatgttccctccacagttcaa
aagacccctttcatcacaaatcctgggtatgacaatggaaatggtatacagcttccaggc
actaccggccagcaacctagtgttgggcaacaaatgatctttgaggaacatggctttagg
cggactacaccacccacagcagcaacccccataaggcataggccaagaccatacccaccg
aatgtagatgaggagattcagattgctaacatccccaggggggatgcagatcatcttcca
tatcctcatgttcttgggctcaatccaaatgcctctacaggacaagaagctctctctcag
actaccatctcttggacaccattccaggaaagttctgaatatatcatttcatgccatccc
attggcattgatgaagaacctttacagttcagagttcctggaacttcagctagtgccaca
ctgaccggccttacccgaggggctacctacaacatcatagtggaggccctgaaaaaccag
aggagacacaaagttcgggaagagatgatcacagtgggcaactctgttaatgaaggattg
aaccaacctacagatgacacatgttttgatccattcactgtcactcactattccatcgga
gaggaatgggagcgattatctgactctggctttaaactctggtgccaatgcttaggtttt
ggcagcggtcatttcagatgtgattcatctaaatggtgccatgataatggcgtgaactac
aagattggcgacaagtgggatcgccaaggagagaatggacagatgatgagctgcacctgt
cttggaaatggaaaaggagaattcaagtgtgatcctcatgaggccacatgttatgatgat
ggaaagacataccatgtaggggaacagtggcaaaaggagtacctcggggccatctgctct
tgcacatgttttggtggacagcagggatggcgttgtgacaactgccgcaggcctggggta
gagacggcacctgaaggctcagcaggccattcctactcccagtattctcagagataccat
cagagaacaaatactaatgtcaactgcccaattgagtgtttcatgcctttggatgtacag
gcagacacagaaaattcacgagattccctagaaaagtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (7)   
   Pfam (7)   
All databases (108)   

Download RDF
DBGET integrated database retrieval system