KEGG   Sarcophilus harrisii (Tasmanian devil): 100930397
Entry
100930397         CDS       T02286                                 
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04613  Neutrophil extracellular trap formation
shr05014  Amyotrophic lateral sclerosis
shr05034  Alcoholism
shr05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100930397 (HDAC6)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100930397 (HDAC6)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100930397 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    100930397 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:shr01009]
    100930397 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100930397 (HDAC6)
   04131 Membrane trafficking [BR:shr04131]
    100930397 (HDAC6)
   03036 Chromosome and associated proteins [BR:shr03036]
    100930397 (HDAC6)
Enzymes [BR:shr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100930397 (HDAC6)
Protein phosphatases and associated proteins [BR:shr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100930397 (HDAC6)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100930397 (HDAC6)
Membrane trafficking [BR:shr04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    100930397 (HDAC6)
Chromosome and associated proteins [BR:shr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100930397 (HDAC6)
SSDB
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Other DBs
NCBI-GeneID: 100930397
NCBI-ProteinID: XP_031800957
Ensembl: ENSSHAG00000001040
Position
X:complement(82134765..82143566)
AA seq 1032 aa
MASQPEKPGLNPSPSGTRMTGQKRGGRKGSPAPRPSPGLAEARRRGRAKKLSQVSEQELV
TNLQDLDLETESEIPSGTGLVLDERMGSFRCPWDDSFPERPERLQAVQQQLSRDCLLERC
IPIEAQPATPQELQLVHSQEYVDLMSSTPDMTQMERRALSDTYDSVYLHPNSFPCALLAT
GALLRLVDALMGGDIRNGLALVRPPGHHAQRDSMNGYCMFNNVAIAARYAQKKHHVPRVL
IVDWDVHHGQGTQFIFEQDPSVLYFSVHRYEQGRFWPHLKASDWRATGNGKGQGYTVNVP
WNQVGMRDGDYISSFLHVLLPIALEFQPEIVLVAAGFDAVLEDPKGEMAVTPGGFAHLTH
LLMSLAKGRLILSLEGGSLVPSRVVPLQTLLGDPCPLLETPCIPCFRICDPLTPPPLITE
PAPDDLKEDYRDMNIGPMPDLEMLGKPLDQGLPMAMNRTGLVYDARMMEHFNMWDSHHPE
RPERIAHIAQRHLELGLTPRCVPRPPAPTRRQLHSEEYIDRIRATSRLKPRDLHREGENY
NSIYLSSQSFACAQLAAGAACRLVEAILTGEVHNGLAIVRPPGHHAERDAACGFCFFNSV
AVAARHAQDMVGRALRILIVDWDIHHGNGTQHIFEEDPSVLYVSLHRYDHGTFFPMAEDA
ASKCVGRGRGEGFTVNVAWNGPRLGDSDYLSAMHHIVMPIAYEFNPELVLVSAGFDAARG
DPLGGCLVSPEGYAHMTHLLMGLAGGHVALVLEGGYNLSSISDSMAACTRTLLGDPPPLF
PWLRPPLPGTFVTLAEVAQVHQKYWQCLRLTVDTEEEEEEEETSLQPAEEESALRQRPPE
ESPPVVLTIGPKLEEQPPSPTSEETLGLESLRLGTHVSGEPEAEPTVSKEEDHEDPGLLG
EAAGGGTPMVGDEFAAEGTVFYAVTPLAWCPHLMTVRSVPEGGLDATQACQDCGTHMENW
LCLSCYQVHCGRYIQAHMLQHHEASGHPVVLSYADLSVWCYACQAYVNHEVLTEAKNTAY
LSKFGEEMPGVL
NT seq 3099 nt   +upstreamnt  +downstreamnt
atggcatcccagcccgagaagccaggcctgaatccttcaccctcaggcacccggatgacg
gggcaaaagaggggcggccggaaggggtcgcctgccccgcggccgagcccgggtttggct
gaggcccgacgcagagggcgagcaaagaaattgagtcaagtgtctgagcaagagctggtg
accaacctgcaggacctagacctcgagaccgagtcagaaataccctctgggacaggccta
gtgctggatgagagaatgggcagcttccgctgcccctgggatgacagtttccctgaacgt
ccagaacgccttcaggccgtgcagcaacagctgtcccgggactgtctgcttgagcgctgt
atccccatcgaggcccagccagccactccccaggagctgcagcttgttcacagccaggaa
tacgtggacctaatgtcatccaccccagacatgactcagatggagcgtcgggccctctcg
gacacctatgattctgtgtacctacacccgaactcgttcccttgtgccctcctggctacc
ggggcactgcttcggctggtggacgccctcatgggaggcgatatccgaaatggactagct
cttgtcaggcctcctggccatcatgcccaacgtgacagcatgaacggctactgcatgttc
aacaacgtggccattgccgcccgttacgcccagaaaaagcaccatgtcccacgggtactc
attgtggattgggatgtccaccacgggcaaggcacacagttcatcttcgagcaggacccc
agcgtcctctacttctctgttcaccgctacgaacagggccgattctggccccacctaaaa
gcttctgactggcgggcaacgggcaatggcaagggtcagggatacacagtcaacgtgcct
tggaaccaggtggggatgagggatggggattacatcagctccttcttacatgtgctgctg
cccatcgctctggagtttcagcccgagatcgtcctggtggccgctggctttgatgctgtt
ctggaggaccccaagggagagatggcagtcactccaggggggtttgcccacctcactcac
ttgctcatgagtctggctaagggaaggctgattctgtctcttgagggtggctccttggtt
ccttctcgggtcgtccctctccagaccctcctgggagacccatgtcccttgctggaaaca
ccttgcatcccctgcttcagaatctgtgatcctttgaccccacccccactcataacagaa
cctgcccctgatgacctaaaggaagattaccgggacatgaacataggccccatgcctgat
ctcgagatgctggggaagcccctggaccagggcctgcccatggccatgaaccgaacgggc
ctggtgtatgacgccaggatgatggagcatttcaacatgtgggacagccaccacccggag
cggcccgaacgcatcgcccacatagctcagcgccacctggagctcggcctgacgcctcgc
tgtgttccccgcccccccgcgcccacccggcgccaactccacagcgaggagtacatcgac
cggattcgggccacgagccgcctgaagccccgtgacctgcaccgggagggcgagaattac
aactccatctacctgtcctcccagtccttcgcctgtgcccagctggctgctggagccgct
tgccgtttagtggaggccatcttgaccggggaggtgcacaacgggttggccattgtccgc
ccaccgggccaccacgctgagagagatgccgcctgtggtttctgcttcttcaattccgtg
gccgtggccgctcgccacgcccaggacatggttggccgagcccttcgaatcctgattgtg
gactgggacattcatcacggcaatgggacacagcacatatttgaggaggacccgagcgtg
ctctacgtgtccctgcaccgctatgaccacggcaccttctttcccatggccgaggatgct
gctagcaaatgtgtgggccggggccggggcgagggcttcaccgtcaacgtggcgtggaac
gggccccggctcggagactccgactacctcagtgccatgcaccatatcgtgatgcccatc
gcctacgagttcaacccggagctggtgctggtgtctgccggtttcgatgctgctcgcggg
gaccccctgggaggctgcctggtctccccggagggctatgcacacatgactcacctgctg
atggggctggccggaggccacgtggctctggtcctcgagggtggctacaacctaagctcc
atctcagactccatggctgcttgtactcggacccttctgggcgacccgcccccgctgttc
ccttggctccggcccccgttgcccgggaccttcgtcacgctggccgaggtcgcccaggtc
caccagaagtactggcagtgccttcggcttactgttgacacagaggaagaagaagaggaa
gaggagacctccttacagccggctgaggaggagagcgccctgaggcagaggcctcccgaa
gagagccccccagtggtgttgaccataggaccaaagctagaggaacagcctccgtccccc
acgtccgaggagaccctgggcctggagtccctgcggctcgggacccacgtttctggggag
ccggaggccgagcccaccgtttccaaagaagaggaccatgaggatcctggcctgctcggg
gaggcggctgggggagggaccccaatggtgggggatgaatttgctgctgaggggaccgtg
ttctatgctgtgaccccattggcctggtgtccacacctgatgaccgtgcgctcggtgccc
gaggggggcctggacgcgacccaggcgtgccaagattgcggcacccacatggagaactgg
ctctgtctgtcttgctatcaggttcattgtggacgctacattcaggctcacatgctccaa
caccacgaggcctcgggccacccagtggtcctcagctacgccgacctgtcggtctggtgt
tacgcttgccaggcctatgtgaaccatgaggttctgacggaagccaagaacaccgcgtac
ctgtccaaatttggggaggagatgccaggggtgctgtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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