KEGG   Stereum hirsutum: STEHIDRAFT_119001
Entry
STEHIDRAFT_119001 CDS       T03127                                 
Name
(RefSeq) RNA-binding domain-containing protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
shs  Stereum hirsutum
Pathway
shs03013  Nucleocytoplasmic transport
shs03015  mRNA surveillance pathway
shs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    STEHIDRAFT_119001
  09122 Translation
   03013 Nucleocytoplasmic transport
    STEHIDRAFT_119001
   03015 mRNA surveillance pathway
    STEHIDRAFT_119001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_119001
   03041 Spliceosome [BR:shs03041]
    STEHIDRAFT_119001
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     STEHIDRAFT_119001
Spliceosome [BR:shs03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    STEHIDRAFT_119001
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 18796402
NCBI-ProteinID: XP_007300997
JGI: Stehi1_119001
Position
Unknown
AA seq 226 aa
MANVVTSLDKPSNYKDSQARYDRRQQNDMLSQSTTLYVGNLSFYTTEEQIHDIFSKCANP
EDGGGVKRIIMGLDRNTRTPCGFCFVEYYTNAEALATMRYISGTKLDERIIRCDLDLGYR
DGRQFGRGKSGGQVRDEHRQDYDPGRGGWGAQAQRLEIERRREVEARYADTEPGGPVAAG
GEDWKDQNTAPESTRKRERSPDDDANEGSRQRARMGDTLDQDEGRM
NT seq 681 nt   +upstreamnt  +downstreamnt
atggctaacgtcgtgacttcccttgacaaaccctcgaattacaaagattcgcaggctcgc
tatgatcggagacaacagaatgatatgctctcccaatccacaaccttatacgtcggcaat
ctgagcttttacactactgaggagcagatccacgatatattttcaaaatgcgccaacccc
gaggacggaggaggggtcaagagaattatcatgggtcttgacagaaacaccaggacacca
tgcggtttctgtttcgtagagtactacacgaacgcggaggcgctcgccacaatgcgctac
atcagcggcacaaaacttgacgaacgtatcattcgttgtgacctggatctgggataccga
gatggtcggcagttcggacgtggaaagagtggcggccaggttcgagacgagcacagacag
gactacgacccaggacgtggcggctggggtgcacaagctcaacgactcgagatcgagagg
cgacgcgaagttgaagcacgttatgcggatactgaaccgggaggacccgtcgcagctggt
ggtgaagactggaaagaccagaatacggctccagagtccactcgcaaacgtgaacggtcg
cccgatgatgatgccaatgagggctcaagacagcgagctcggatgggcgacacattggat
caagatgagggccggatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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