KEGG   Sphingobium xenophagum: CJD35_12360
Entry
CJD35_12360       CDS       T05146                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shyd03032]
    CJD35_12360
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_12360
Enzymes [BR:shyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CJD35_12360
DNA replication proteins [BR:shyd03032]
 Prokaryotic type
  DNA Topoisomerases
   CJD35_12360
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CJD35_12360
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: ASY45143
UniProt: A0A249MUU7
Position
I:complement(2533673..2536336)
AA seq 887 aa
MNDETSLADPSDISPVSIVDEMKASYLDYAMSVIVSRALPDVRDGLKPVHRRILFSAQES
GFVYNRPYRKSARLVGEVMGKYHPHGDSSIYDALARMTQDWSMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVANALLEDLDKDTVDFTPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVLRACLAYIDNPGITIDELIAIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRHVVEEGRGDRQSIVLTAIPYQVGKNGLVEKIAEAAKEKRIEGISDIRDES
SREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLNLRDIIEAFVK
FREEVITRRTKFELNKARDRAHILLGLVVAVSNLDEMVKIIRGSSSPAEAREKLLAREWP
IGEIAPYIRLVEAIDVEVAGDFYKLSDLQVRAILDLRLHRLTALGRDEIGKELAELADAI
AEYLAILGDRVKLYAVMREEFEEIEREFATPRLSEITAAADGIEDEDLIEREDMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAITELFVTSTHTPVLFFSTAGKVYRMKVW
RLPEGGPATRGRPMVNLLPLGPGETIRTVLPLPEDEDSWKDLHVMFATANGTVRRNSMDA
FANVPSNGKLAMRFDEGSEDRLIGVALLTENDDVLLATRQGKAIRFAATDVREFQSRTST
GVRGMTLKSDDEVISLSILHRSGANQEQREEYLRYAPWKPEKDGEMADQAMFALMKEREQ
FILTVCANGYGKLSSAYDYRRTGRGGQGITNIDNIGRNGPVVGSFPVTHGDHLMLVTDQA
KLIRMGLDSLRVIGRNSAGVRLFDVAKDEHVVSAARIEENDEDEAEA
NT seq 2664 nt   +upstreamnt  +downstreamnt
ttgaacgacgagaccagcctcgccgacccttcggacatcagccccgtcagcatcgtagac
gagatgaaggcgagctatctcgactatgccatgtcggtcatcgtgtcccgcgccctgccg
gatgtgcgcgacgggttgaagccggtgcatcgccgcattctcttctccgcccaggaatcg
ggcttcgtctataatcgtccctaccgcaaatcggcgcgtctcgtcggcgaagtcatgggt
aaatatcacccccatggcgacagttcgatctatgacgcattggcccgcatgacgcaggac
tggtcgatgcgcgtgccgctgatcgatggtcagggcaatttcggttcgatggaccccgac
ccgccagccgctatgcgctataccgaagcgcgcctggccaaggtcgccaacgccctgctg
gaggatctcgacaaggatacggtcgatttcacccccaactatgacgcatcggaaagcgaa
ccgcaggttctgcccgcccgcttccccaacctgctggtcaacggcgcgggcggcatcgcg
gtgggcatggcgaccaacatcccgccccataatctgggcgaagtgttgcgcgcgtgcctt
gcctatatcgacaatcccggcatcacgatcgacgaactgatcgcgatcgtccccggtccc
gatttcccgaccgcgccgctgatcctgggccagtccggcgcacgcagcgcctatcacacc
ggccgcggctccatcatgatgcggtcgcgtcatgtggtcgaggaagggcgcggcgatcgc
cagtcgatcgttctgaccgccattccctatcaggtcggcaaaaacggtctggtcgaaaag
attgccgaagccgccaaggaaaagcggatcgaggggatcagcgacattcgcgacgaatcc
agccgcgaaggcgtgcggatcgtcatggacctgaagcgcgatgcgacccccgaagtcgtt
ctgaaccaattgtggcgcaacacccccgcccaatcgagcttcccggccaatatgctggcc
attcgcggcggccgccccgaactgctgaacctgcgcgacatcatcgaagccttcgtcaag
ttccgcgaagaggtgatcacccgccgcaccaagttcgagctgaacaaggctcgcgaccgg
gcgcatatcttgctgggtctggttgttgcggtcagcaatctggacgagatggtgaagatc
atccgtggatcgtccagtcccgccgaagcgcgcgagaagctgctggcccgcgaatggccg
atcggcgagatcgcgccctatatccggctggtcgaggcgatcgacgtcgaagtggccggg
gatttctacaagctgtccgaccttcaggtccgcgccatcctcgacctgcgcctgcatcgg
ctgacggcgctgggccgcgacgaaatcggcaaggaactggccgaactggccgacgcgatc
gccgaatatctggcgatcctgggcgaccgggtcaaactctatgccgtcatgagggaagag
tttgaagagattgaacgggaattcgctacgccccgtttgtccgaaatcaccgccgctgcc
gacgggatcgaggatgaggatctgattgagcgagaggatatggtcgtcaccgtcacggtg
cagggctatatcaagcgcacgccgctggagagcttccgcgcacaggcgcgtggtggcaag
ggccggtcgggcatggcgaccaaggatgaggacgccatcaccgaattgttcgtgacgtcg
acccatacgccggtgctgttcttctctaccgccggcaaagtctatcgcatgaaagtatgg
cgcctgcccgaaggcggcccggcgacgcgcgggcggccgatggtcaacctgctgccgctt
ggtcccggcgaaaccatccgcaccgtgctgccgctgcccgaagatgaggatagctggaaa
gacctgcacgtcatgttcgccaccgcgaacggcactgtccggcgtaacagcatggacgct
tttgccaatgtgccgagcaatggcaagctggcgatgcgcttcgacgaaggcagcgaagac
cggctgatcggcgtcgcgctcctgaccgagaatgatgacgtgctgctcgccacgcgccag
ggcaaggcgatccgctttgccgcaactgatgtgcgcgagtttcagagccgcacgtcgacc
ggcgtgcgcggcatgacgctcaagagtgacgatgaagtcatctccttgtccatcctgcat
cgatcaggcgccaatcaggaacagcgcgaggaatatctccgctacgccccgtggaagcct
gaaaaggacggcgaaatggccgatcaggcgatgtttgcgctgatgaaggagcgcgagcag
ttcatcctgaccgtctgcgccaatggatatggaaaactctcctccgcctatgattatcga
cgcaccgggcgtggtggacagggcatcaccaatatcgacaatatcggtcgcaatggaccg
gtcgtcggcagcttcccggtcacgcatggagatcatctgatgctggtgaccgatcaggcc
aagctgatccgcatgggcctcgacagcctgcgcgtcatcggccgcaattccgcgggcgtc
cgcctgttcgacgtggccaaggatgagcatgtcgtcagcgccgcgcgcatcgaagagaat
gatgaggacgaagccgaggcatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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