KEGG   Streptococcus intermedius B196: SIR_0412
Entry
SIR_0412          CDS       T02830                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
sib  Streptococcus intermedius B196
Pathway
sib03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    SIR_0412 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sib03400]
    SIR_0412 (xseA)
Enzymes [BR:sib01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     SIR_0412 (xseA)
DNA repair and recombination proteins [BR:sib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     SIR_0412 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RMI2
Other DBs
NCBI-ProteinID: AGU75786
UniProt: T1ZDI9
Position
392521..393861
AA seq 446 aa
MAEYLSVSTLTKYLKLKFDKDPYLERVYLTGEISNFRKRPNHQYFSLKDEKAVIQATIWG
GVYKKLGFDLEEGMKINVVGRIQLYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKRLGEE
GLFETRFKQTLPRFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIILYPTKVQGEGAATQ
VADSIRRANTRRDLDVLIIGRGGGSIEDLWSFNEEIVVRAIFESQIPIISSVGHETDTTL
ADFVADRRAATPTAAAELATPVTKLDLLAHIQQQQNRLATATSNRLTYNRERWGKLSQSV
IFRQPERLYDGYLQKLDQLNLRLKQQIREYYSEGMQQARLLEHRLEALSPLSMVQTYQER
AVQLERLLRSNTAVIYDYKVAEVKRLSDALLMLDTSRIVARGYAIVQKDDKVVSGAKDIE
TGDKVSVVMRDGHLEVEVKNVKRKEI
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggctgagtatttatctgtatcgaccttgactaaatatttaaagttaaagtttgataaa
gatccttatttagagcgggtttatttgacaggagaaatttccaattttcgcaaacgtccg
aatcatcagtatttctctctcaaagatgaaaaggctgttattcaggcaacaatctggggc
ggagtttacaaaaagctaggttttgacttggaagaaggcatgaaaatcaatgttgtcggc
cggattcagctttatgagccaagtggctcctactctattatcattgaaaaagcggagccc
gatggtgtaggggctttagcaattcagtttgagcagctaaaaaaacgattaggggaagaa
ggcttgtttgagactcgatttaaacaaaccttaccacgatttcctaagaaaattggggta
gtgactagtcctagtggtgcagtgattcgtgatattattacaactgttagccgtcgtttt
ccaggagtagagattattctttatccaaccaaagtacagggagaaggagctgctactcag
gtggcagatagtatccgtcgtgctaatacgcgaagggatttagatgtccttatcatcggc
cgaggtggtgggtcaattgaagatctttggtcatttaatgaagaaattgttgtccgtgct
atttttgaatctcaaattccaatcatttcaagtgtagggcatgaaacagatacgactttg
gcagattttgttgcagatagacgcgccgcaacgccaactgccgctgcagaactagcaacg
cctgtaacaaaattggatctcttagcgcacatacagcagcaacaaaatcgtttggctact
gctacatctaatcgtcttacttataatcgtgagcgatggggtaagttgagccagtctgtc
atttttcgtcaaccggaacgattatatgatggctatcttcaaaaattagatcaattaaat
ttgcgactcaagcaacaaattcgcgaatattatagtgaagggatgcagcaagcaaggttg
ttagaacatcgtttggaggctttatctcccttaagcatggttcagacttatcaagaacgt
gcagtccagttggaacgccttttacgtagcaatacggcagtgatttatgattacaaggta
gcagaagtcaagcgattatctgatgcattgcttatgttggataccagtcgaattgtggct
cgtggctatgcgattgttcaaaaagacgacaaggtggtgtcaggtgccaaagatatagaa
acgggtgacaaggtcagtgtggttatgcgtgatggtcatctggaagttgaggtaaaaaat
gtcaaaagaaaagaaatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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