KEGG   Streptococcus infantarius subsp. infantarius: Sinf_0215
Entry
Sinf_0215         CDS       T01765                                 
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
sif  Streptococcus infantarius subsp. infantarius
Pathway
sif03030  DNA replication
sif03430  Mismatch repair
sif03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sinf_0215 (polC)
   03430 Mismatch repair
    Sinf_0215 (polC)
   03440 Homologous recombination
    Sinf_0215 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sif03032]
    Sinf_0215 (polC)
   03400 DNA repair and recombination proteins [BR:sif03400]
    Sinf_0215 (polC)
Enzymes [BR:sif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sinf_0215 (polC)
DNA replication proteins [BR:sif03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sinf_0215 (polC)
DNA repair and recombination proteins [BR:sif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sinf_0215 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger PHP DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon RNase_H_2 Rv2179c-like HHH_3 DEDDh_C Zn-ribbon_8
Other DBs
NCBI-ProteinID: AEZ61582
Position
213221..217615
AA seq 1464 aa
MSELFKKLMEQIDMPLDMRQSSAFSSADIREVKVHSVSRLWEFHFSFAEILPIDIYRELS
YRLVNTFKQADIRATFDIQAETVDFSQPLLQAYYEEAFEHAPCDSASFKASFSKLNVSYD
GTKLLIEAPAFVNNDHFRKNHLPNLARQFEAFGFGKLTIDMVSDEAMTQALREDFTSNRE
AMVEKAVQENREAVKSLEASMPTTEEAPKPKFDFKERAKQRRVGFENAEITPMVEVTTEE
NRIVFEGMVFDVEKKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELKKYDMIAKGSWLR
VRGNVENNNFTHALTMNVQDVKEIVHHDRKDLMPEGQKRVEFHAHTNMSTMDALPTVEEL
IDTAAKWGHKAVAITDHCNVQSFPHGYHRARKNGIKAIFGLEANIVEDKVPIAYNPQDIE
LNEATFVVFDVETTGLSAVNNDLIQIAASKMYKGNIVEQFDEFINPGHHLSAFTTELTGI
TDNHVRNAKPIEEVLQMFQDFCQDTVLVAHNATFDVGFMNANYERHGMPIITQPVIDTLE
FARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEARENHNLTNMMD
LNTKLVAEDSYKKARVKHATIYVQNQTGLKNIFKLVSLSNVKYFEGVARIPRTVLDAHRE
GLLLGTACSEGEVFDAVLSSGVDAAVKVAKYYDFIEVMPPAIYAPLLAQGTIKDEEGIRQ
VIRDLLEVGRRLNKPVLATGNVHYIEPEDEIYREIIVRSLGQGAPINRPIGRGEDAQPAP
LPKAHFRTTNEMLDEFAFLGEDVAYEIVVKNTNDFADRFEEVEVVKKDLYTPFLEKSEER
VAEMTYQKAFEIYGNPLPDIVDRRIEKELTSILGNGFAVIYLASQMLVIRSNKRGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSVGSGYDLPDKDCPECGTRYK
KDGHDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYGKMYPEAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDLSAEWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIPADDPDVMAL
FSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGMWLKISDEERNG
YIEAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHYPIYYYCAYFSIRA
KAFDIKTMSAGLDAVKERMAEISTKRKNNEASNVEIDLYTTLELVNEMLERGYKFGQLDL
YRSDATEFIIDGDTLIPPFVAMDGLGENVAKQIVKAREEGEFLSKMELRKRGGVSATLVE
KMDEMGILGNMPEDNQLSLFDDFF
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgtcagaattatttaaaaaattgatggagcaaatcgatatgccgcttgacatgcgacaa
tcttctgctttttcatctgcagatattcgtgaagttaaggtgcattctgtatctcgcctc
tgggagttccatttttcatttgcggaaattttgccaattgacatctatcgtgaattgtct
tatcgattggtgaacacttttaagcaagcggatatcagagcgacttttgatattcaggca
gaaactgtcgatttttcacaacctttattgcaagcctattatgaagaggcttttgagcat
gctccgtgtgatagcgccagcttcaaggcttctttcagtaaattgaatgtctcttatgat
ggcacaaaattattgattgaagcgccagcatttgttaacaatgaccattttcgcaaaaat
catctgcctaatctagctcgtcaatttgaagcatttggttttggcaaacttaccattgac
atggtttctgatgaagcgatgacgcaagctttacgagaagactttacgtcaaatcgcgaa
gctatggtggaaaaagcggtgcaagaaaatcgtgaggcggttaaatctctggaagcttct
atgccaacaactgaagaagcaccaaaacctaaatttgattttaaagaacgtgccaaacag
cgccgtgtaggttttgaaaatgccgaaatcacaccaatggttgaagtcacaacagaagaa
aaccgaattgtctttgaaggaatggtttttgacgttgaaaagaaaacaactcgtacagga
cgtcacattattaattttaaaatgactgactacacatcaagttttgccatgcaaaaatgg
gcaaaagatgatgatgagttgaaaaaatacgatatgattgccaaagggtcatggcttcga
gttcgtggaaatgttgaaaataataatttcacccatgcattgaccatgaatgtgcaagat
gtcaaagagattgttcatcatgaccgcaaggatttaatgccagaaggtcaaaaacgtgtg
gaattccatgctcatacgaatatgtcaactatggatgcgttaccaacggttgaagaatta
attgatacagcagcgaaatggggacacaaggctgttgctattactgaccactgcaatgtg
caaagtttcccacacggctatcacagagcacgtaaaaatggtatcaaggcgatttttggt
ttagaagctaatatcgttgaggacaaagtgccgattgcctacaatcctcaagatattgag
ttaaacgaagctaccttcgtcgtatttgatgtggaaacgactgggctttctgcggtcaat
aatgacttgattcagattgcggcttcaaaaatgtacaagggaaatattgttgagcagttt
gatgagttcatcaacccaggtcatcatttatcagcttttacaacggaattgactggtatt
acggataatcatgttcgcaatgctaaaccgattgaagaagtccttcaaatgttccaagat
ttttgtcaggatactgtgctagttgcccacaatgcaacctttgacgttggctttatgaat
gccaattatgaacgtcatggcatgccaatcattacacaacctgtcattgataccttggaa
ttcgcccgaaatctctatccagaatacaaacgtcatggtttgggaccattgaccaaacgg
ttccaagtttcgctagaacaccaccatatggcgaactatgatgcggaagcaacggggcgc
ttgctctttattttcttgaaagaagcacgtgaaaatcacaatttaaccaatatgatggat
ttgaatacgaaattggttgctgaggattcttacaagaaagcacgtgtcaaacacgcgacg
atttatgttcaaaaccaaacaggtttgaaaaatattttcaaacttgtcagcctttctaat
gtcaaatattttgaaggtgtggctcgtattccaagaacggttcttgatgcccaccgtgaa
gggctcttgctaggaacagcctgctcagagggcgaagtctttgacgcagttttatcttca
ggggtagatgctgcagtcaaagtggcgaaatattatgatttcatcgaagttatgccacca
gcgatttacgctccactattggcgcaaggaacaatcaaagatgaagaaggtatccgacaa
gtcattcgagatttgcttgaggttggacgtcgtctgaacaagcctgttttggcgactggg
aatgtccattatatcgagcctgaagatgagatttaccgtgaaatcattgtccgtagtcta
gggcaaggggcaccgattaaccgtccgattggtcgtggtgaagacgctcaacctgctccg
ctaccaaaagcacatttccgtacaaccaatgaaatgttagatgaatttgcctttcttggc
gaagatgtcgcgtatgaaattgttgttaagaataccaatgattttgctgaccgtttcgag
gaagttgaggttgttaagaaagacttgtacacacctttccttgaaaaatcagaagaacgt
gtcgctgaaatgacctatcaaaaagcctttgaaatctatggtaatccactaccagatatt
gttgaccgacgtattgaaaaagaattgacttcgattttgggtaatggatttgccgtgatt
tacctggcgtctcagatgttggttattcgttctaataaacgtggttacttggttggttcg
cgtggatctgttggttcaagtttcgtggcaaccatgattgggattaccgaagttaaccca
atgccgccacactatgtctgtccaaattgtcagcattcagaattcatcaccgatggttct
gttggttctggttatgatttgcctgacaaggattgcccagaatgtggcacacgttacaag
aaagatggacacgatattccgtttgaaacctttcttggttttgatggagacaaggttccc
gatatcgatttgaacttctctggtgatgaccaaccgtcagctcacttggacgttcgtgat
atttttggagaacaatatgcctttcgtgccggaaccgttggtacggtcgctgaccgtaca
gcttacggatttgttaaaggttatgaacgtgattacgggaaaatgtacccagaagcagaa
gttgaacgcttggcacaaggtgctgcaggggtgaaacgtacaactggacaacacccgggt
ggtatcgttgttattccaaactacatggatgtttatgactttacgccagttcagtatcca
gccgatgatttgtcagctgaatggcaaacaactcactttaacttccacgatatcgatgaa
aacgtcttgaaacttgatatcctcggtcatgatgatccgacgatgattcgtaagttgcaa
gacttgtctggtattgatcccaaagatattcctgcggatgacccagatgttatggcactc
ttctcgggaacagaagttttaggagttactcctgaacaaatcggaacaccaacaggtatg
cttggtattccagaattcggaacaaacttcgttcgtggtatggttgaagaaactcaccca
acaacatttgccgaattgctccagttatcagggctttctcatggtaccgacgtttggcta
ggaaatgctcaagacttgattaaagaggggattgctacgctgaaaaccgttatcggttgt
cgtgacgacatcatggtttacctcatgcacgcaggtttggagccaaaaatggcttttacc
attatggaacgtgtgcgtaagggaatgtggcttaaaatctctgacgaggaacgtaatgga
tacattgaagctatgcgagaaaataatgtgcccgactggtacattgaatcctgtggtaaa
atcaagtatatgttccccaaagcccatgcggcagcctacgttttaatggcgcttcgtgta
gcttactttaaagtacattatccgatttactactactgtgcttatttctcaatccgtgct
aaggcctttgacattaagacaatgagtgctggtcttgacgccgttaaagaacgcatggct
gagatttcaaccaaacgtaaaaataatgaagcttcaaacgttgaaattgacctttataca
acactcgagttggtcaatgaaatgcttgaacgtggttataaatttggtcagcttgacctt
taccgcagtgatgcgacagagttcatcattgacggtgatacccttattccaccatttgta
gctatggatggtctcggagaaaacgttgcaaaacaaatcgttaaagcgcgtgaagaaggt
gaattcctatctaaaatggaacttcgcaaacgcggtggtgtttcagcaacactagttgaa
aaaatggatgaaatgggaatcctaggcaacatgccagaagataaccagctcagtttgttt
gacgatttcttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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