KEGG   Streptococcus ilei I-G2: N596_06190
Entry
N596_06190        CDS       T02879                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sig  Streptococcus ilei I-G2
Pathway
sig03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N596_06190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sig03019]
    N596_06190
Messenger RNA biogenesis [BR:sig03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     N596_06190
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 DUF4453 Lactamase_B_6
Other DBs
NCBI-GeneID: 17316471
NCBI-ProteinID: AGY40382
Position
1257380..1259062
AA seq 560 aa
MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVENIDRVKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRGAKL
YEINQNTELTFKHIKATFFRTTHSIPEPLGIVLHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRLQ
QAADAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPPGTIIEPSEIKDYPANEILIMCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNRLINIISEAGVDVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLARDCGVEKDNIFIMSNG
DVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFKSKM
ILAGPDILSRGFIYMRESGDLIRESQRILFNAIRIALKNKDANIQTVHGAIVNALRPFLY
ESTEREPIIIPMILTPDEEN
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggcatataccttaaaacctgaagaagttggtgttttcgccattggaggtctcggggaa
atcggtaaaaatacctatgggattgaataccaagacgaaatcatcattgtggatgctggg
attaagttccctgaagatgatttgttagggattgattacgtgattcctgactattcctat
atcgttgaaaatatcgaccgtgtcaaaggtgtcttgattacccacggacacgaagaccat
atcggaggaattcccttcctcttgaaacaagctaatgtaccaatctatgctggacctttg
gctctagcccttattcgtggaaaattggaagagcatggcctccttcgtggtgccaaactc
tatgaaatcaaccaaaatacggagctgacctttaagcatattaaagcgaccttcttccgg
acgacccactccattccagaacctttggggattgttcttcatacgcctcaaggaaaaatc
gtctgcacgggagactttaaatttgacttcacacctgttggggagccggccgaccttcac
cggatggctgcactaggagaggaaggcgtcctctgtctgctttctgactcaaccaacgcg
gaagtcccaacctttaccaactctgaaaaagtcgttggccaatccattatgaagattatt
gaaggcattcatggacgcatcatctttgcttcctttgcctcaaacatcttccgtctccaa
caggctgcagatgccgctgttaaaacgggccgtaagattgttgtctttggacgctcgatg
gaaaaagccattgtcaacgggattgagctgggctatatcaaggtaccacctggaacaatt
attgaaccaagtgagatcaaagactacccggcaaacgaaatcctcattatgtgtacagga
agccaaggggagccaatggcggcactgtctcgtatcgctaatggaacccaccgccaagtg
caattgcaaccgggtgataccgttatcttctcatctagtccaattcctggcaacacaacg
agcgtcaaccgcctgatcaacatcatctctgaagcaggagtcgatgtcatccacggtaag
attaacaatatccatacctctggacacggtggtcaacaagaacaaaagctcatgttgcgc
ttgatcaagccaaaatacttcatgcctgttcacggtgagtaccgcatgcagaaaattcat
gctggacttgcgcgtgattgcggagtagaaaaggataacatcttcatcatgagcaacggt
gatgtccttgccttaacagccaactcggctcgtatcgcaggaagtttcaatgctcaagat
atctatgtcgacggaaatcgcatcggagaaatcggagctgctgtccttcgtgaccgcaaa
gatttatcagaagatggtgttgtcctagctgttgcgacagttgacttcaagtcaaaaatg
attttagctggaccagatattctcagtcgtggtttcatctatatgagagagtctggtgac
ctgatccgtgaaagtcaacgtatcctcttcaatgctatccgaatcgccttgaagaacaaa
gatgccaacattcaaaccgtacacggtgctattgtcaatgccctccgtcctttcctttac
gaaagtacggaacgtgaacccatcatcatcccgatgattttgacaccagatgaagaaaat
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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