KEGG   Ruegeria pomeroyi: SPO0346
Entry
SPO0346           CDS       T00215                                 
Symbol
sucD
Name
(GenBank) succinyl-CoA synthase, alpha subunit
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
sil  Ruegeria pomeroyi
Pathway
sil00020  Citrate cycle (TCA cycle)
sil00640  Propanoate metabolism
sil00660  C5-Branched dibasic acid metabolism
sil01100  Metabolic pathways
sil01110  Biosynthesis of secondary metabolites
sil01120  Microbial metabolism in diverse environments
sil01200  Carbon metabolism
Module
sil_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sil_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:sil00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    SPO0346 (sucD)
   00640 Propanoate metabolism
    SPO0346 (sucD)
   00660 C5-Branched dibasic acid metabolism
    SPO0346 (sucD)
Enzymes [BR:sil01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     SPO0346 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Other DBs
NCBI-ProteinID: AAV93664
UniProt: Q5LXC5
Position
complement(359481..360365)
AA seq 294 aa
MAVLIDENTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGMEHLGLPVFNSVHEA
KHVTEANATVIYVPPPFAADSILEAIDAQMEVIVCITEGIPVLDMMKVKRALEGSSSRLI
GPNCPGVITPDACKIGIMPGHIHKRGSVGVVSRSGTLTYEAVKQTSDIGLGQSTAVGIGG
DPIKGTEHIDVLEWFLADDETESIIMIGEIGGSAEEEAAQFLKDEAKKGRKKPVAGFIAG
RTAPPGRRMGHAGAIVAGGKGGAEDKIEAMRSAGIVVADSPATLGEAVLEAIGK
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcagtcctcatcgacgaaaacaccaaagtgatctgtcagggctttaccggctcgcag
ggcacattccactctgaacaggccatcgcctatggcaccaagatggtcggcggtgtgact
cccggcaaaggcgggatggagcatctgggcctgcccgtgttcaactcggtccacgaagcc
aagcatgtgaccgaagccaatgccaccgtgatctatgtgccgccgcccttcgccgccgac
tcgatccttgaggcgatcgacgcccagatggaggtgatcgtctgcatcaccgaaggcatc
ccggttctggacatgatgaaggtcaagcgcgcgctcgaaggctcgtcctcgcgcctgatc
ggtcccaactgccccggcgtgatcacgcccgatgcctgcaagatcggcatcatgcccggc
catatccacaagcgcggcagcgttggcgttgtgtcccgctcgggcacgctgacctatgag
gcggtgaaacagacctcggatatcggtctgggccagtccaccgccgtgggcatcggcggc
gacccgatcaaggggaccgagcatatcgacgtgctggaatggttcctggccgacgatgaa
accgaaagcatcatcatgatcggtgaaatcggcggcagcgccgaggaagaagccgcccag
ttcctgaaggatgaggccaagaaaggccgcaagaagccggtcgccggtttcatcgcgggc
cgcaccgcccctccgggccgccgcatgggccacgcgggcgccatcgtcgccggcggcaag
ggcggcgccgaggacaagatcgaagccatgcgttcggctggcatcgtcgtggccgacagc
ccggcaaccctgggcgaggccgtgctggaagcgatcggcaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (70)   

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