KEGG   Sulfolobus islandicus M.16.27: M1627_2037
Entry
M1627_2037        CDS       T00900                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
sim  Sulfolobus islandicus M.16.27
Brite
KEGG Orthology (KO) [BR:sim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sim03019]
    M1627_2037
   03009 Ribosome biogenesis [BR:sim03009]
    M1627_2037
   04131 Membrane trafficking [BR:sim04131]
    M1627_2037
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sim04147]
    M1627_2037
Messenger RNA biogenesis [BR:sim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     M1627_2037
Ribosome biogenesis [BR:sim03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    M1627_2037
Membrane trafficking [BR:sim04131]
 SNARE
  SNARE associated proteins
   Others
    M1627_2037
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    M1627_2037
Exosome [BR:sim04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   M1627_2037
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N CDC48_2 RuvB_N AAA_16 AAA_5 AAA_2 AAA_22 TIP49 AAA_33 AAA_14 IstB_IS21 AAA_18 AAA_28 nSTAND3 Vps4_C Mg_chelatase RNA_helicase AAA_24 ATPase_2 Parvo_NS1 Sigma54_activat AAA_17 AAA_3 Zeta_toxin TsaE AAA_7 ATP-synt_ab ABC_tran NACHT DUF815 NB-ARC Bac_DnaA AAA_25 UFD1 PhoH ATPase SPT16
Other DBs
NCBI-ProteinID: ACP55906
UniProt: C3MZS4
Position
complement(1902416..1904725)
AA seq 769 aa
MSASSGEEQKPQRKELILRVMEARQKDVGRGKVRIDIDLLSQIDVSPGDVVEIEGTRKTA
ALAWPLSPEDTTTGEKDIIRMDGITRKNAGVSIGDKVIVRKAVVKPASTVKLAPSNFSIT
VDPGFISYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP
VEPSRYPRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKT
LLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPK
RDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLP
DKQGRLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDL
NQDKIPPEILESMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEV
VEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWV
GESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISYDSGVTERIVNQLLAEMDGIEKL
ENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPDKRARIEILKVHTRNIVLGEDISLED
VAEKTEGYTGADLAALVREATMRAIRESMKICIEKTNESCKSTDTECKDKTMKECMKVNG
VKVSLRHFEEAMRKVKPSVTQDMLQFYQNWVEKARQQLPKTTVKPSTYA
NT seq 2310 nt   +upstreamnt  +downstreamnt
ttgagcgctagttctggtgaggaacagaaaccgcaaagaaaggagttaatacttagagta
atggaagctagacagaaagatgtcggaagaggaaaagtgcgaattgatattgatttacta
tcgcaaattgatgtaagcccaggtgacgttgttgaaattgaaggaacaagaaagactgct
gcacttgcatggcctttatcgcctgaggatacaacaactggagaaaaggatataataaga
atggatgggataaccaggaaaaacgctggagtctcaattggagataaggttatagtaaga
aaagcagttgtaaagccagctagcacagtaaaattagcaccatctaacttctcaattact
gtagacccagggttcattagttatgttaagaaacgattaaaagaattccccctagttgaa
ggagatacggtattgattcctgtcctagggcaagccataccgtttactgtagtccaagtc
aaaccagcaggtatagttctagtgaatgacgatacgataataagcatatctgataagcca
gtagaaccttccagatatcctagagtcacatatgaggatataggtggaatgaaaaatatt
atagaaaaagtcagagagttagttgaattgcctttaagacatccagaactatttaagaga
ttaggaatagaaccacctaagggtatattattatatggtcctcctggagtgggaaagacg
ttactagcgaaagcaatagctaatgaaactgatgcatactttacttcaattaatggaccg
gaaataatgagcaaattctacggagagagtgagcaaagattaagggaaatatttgaagac
gctaaaaaacatgctcctgcaattattttcgtagatgaaatagacgcaatagcaccgaaa
agagacgaagtgataggagaagtagaaagaagagttgtcgcacagttactcactctaatg
gatggtcttgaaaatagaggaaacgtaatagtaatagctgcaaccaatagaccaagtgct
gttgatccagccctgagaaggccagggagatttgatagagagatagaaataccgttacca
gataaacaaggaagattggaaatattacaaatccatacaaggaatatgcctttatctaaa
gatgttgacctagagaagcttgcagatatgacacatggatatactggtgctgacttatct
gcattagtaagagaagctgcaatgaattccttaagaagatacttgccaaagatagatttg
aatcaagataagatacctccagaaatattagagtctatggaagttaagatggaagatttc
ataaacgcattcaaagaaatagtaccaagtggcttaagagaaatttacatagaagttcca
gaggttaaatggacagatataggtggcctcgaagaaataaaagaggagttaaaagaagta
gttgaatatcctctgaaatactcggagctataccaaaattctggtatagaaccacctaag
ggtatattgttatttggtccaccaggaactggaaagacgatgcttgcaaaggctgttgca
actgaaagcggagcaaacttcatagcagtgagaggaccagaaatattatccaaatgggta
ggtgaaagtgaaaaagcagttagggaaatatttagaaaagctagaatgtacgcgccggct
gtaatattctttgacgaaatagattcaatagctccaataagaggaatctcttacgattct
ggagtaacggagagaatagtaaatcaactattagcggaaatggatggaattgaaaaatta
gaaaacgtagtagtaatagctgcaaccaatagaccagatatcttagatccagcactatta
agaccaggaaggtttgagaaattaatttacgtacctccaccagacaagagagcaagaata
gaaatattaaaggttcatactaggaacatagtgttaggggaggacatcagcttagaggat
gtagctgaaaagactgaaggttataccggagctgatttagctgcactggtaagagaagct
acaatgagagctataagggagagtatgaaaatatgtatagagaaaaccaacgagagttgt
aaatccactgacactgagtgcaaagataaaactatgaaagagtgtatgaaggttaacggg
gttaaggtttccttgagacatttcgaagaagctatgaggaaagttaagccatcagttacg
caagatatgctgcaattctatcaaaattgggtagaaaaagctaggcagcaattgcccaaa
actaccgttaaaccaagtacatatgcgtga

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Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (49)   

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