KEGG   Sesamum indicum (sesame): 105157744
Entry
105157744         CDS       T04135                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105157744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105157744
   03009 Ribosome biogenesis [BR:sind03009]
    105157744
Enzymes [BR:sind01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105157744
Spliceosome [BR:sind03041]
 Complex A
  U1 snRNP components
   U1 related factors
    105157744
 Complex B
    105157744
Ribosome biogenesis [BR:sind03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    105157744
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 105157744
NCBI-ProteinID: XP_011072507
UniProt: A0A6I9SQV0
Position
LG3:complement(8812209..8817690)
AA seq 507 aa
MSRYDSRSADPGSYRDRRGDSGFGYKREYESSYRSSSSAKREYDGVAQSPPRKSDLDGLT
PFEKNFYVESPSVAAMSEGEVEEYRRRREITVEGKDVPKPVKSFRDVGFPDYVMQEIVKA
GFTEPTPIQAQGWPMAMRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV
LAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML
ESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLYWSATWPKEVEQLARR
FLFNPYKVIIGSPDLKANHAIHQHVEIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGC
DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRAGKSPIMTATDVAARGLDVKDVKYVI
NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELVAM
GRGAPPPPAYGGGRDRGRGYGGGRSWN
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgagccgctatgacagccgctccgccgaccctggctcctaccgcgaccgccgcggggat
tcggggtttggttataaaagggaatacgagagcagttatcggtcttcatcttcggcgaag
agagagtacgacggtgtggcacagtcgccaccgcgaaaatcggatttggatggactgaca
ccgtttgaaaagaacttttatgtggagtctccgtctgttgctgccatgtcagaaggtgag
gtggaggaatataggcggcgacgggagattactgtcgaaggaaaggatgtgcccaagccc
gttaagagttttcgggatgttggttttccagattatgttatgcaagaaattgtaaaagct
gggtttaccgaacctacacctattcaagctcaaggttggcctatggctatgaggggacga
gatcttattggtatcgcagaaacagggtctgggaagacgcttgcttatctgctacctgct
attgttcatgttaatgctcaaccatttctagctccgggggatggtccaatagttttagtg
ttagctccaactcgtgaacttgccgttcagatacaacaagaagctactaaatttggtgca
tcatcaaagattaagaatacatgcatatatggtggggttcctaagggaccccaggttcgt
gatctccagaaaggtgttgaaattgtcattgctacgcctggaaggctgatcgatatgtta
gaatcacatcatacaaacttgagaagggtaacatatctggtcttggatgaggcagatcgg
atgctagacatgggctttgagcctcagatacggaaaattgttgatcagatccggccagat
cgtcaaactttgtactggagtgccacatggccaaaggaagttgaacaacttgccagacga
ttcctgtttaatccatataaagtgattattggttcgccagatttgaaagcaaaccatgca
attcaccaacatgttgaaattgtatctgagaaccaaaaatataacaaattagtgaagctg
ctggaggacattatggatggtagccgcattttgatattcatggacaccaagaaagggtgt
gatcaaataactaggcagctccgaatggatggttggcctgcattatctattcatggagac
aaaagtcaagcagaaagagattgggtcctatcagaattcagggctggcaagagcccaata
atgacagctacagatgttgcagctaggggtctagatgtgaaggatgtgaaatatgtcatc
aattatgactttccgggatctctagaggattatgttcatcgtatagggcgaacaggaagg
gctggtgctaaaggtactgcatacacttttttcactgctgctaatgccagattcgcaaag
gacctcattaacatcctcgaagaggctggacagaaagtcagccctgagctggtagctatg
ggacgtggtgcacctccaccaccagcgtatggtggtgggcgagatcgtggaaggggatat
ggtggcggccgttcttggaactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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