KEGG   Sesamum indicum (sesame): 105159733
Entry
105159733         CDS       T04135                                 
Name
(RefSeq) DNA-binding protein SMUBP-2
Organism
sind  Sesamum indicum (sesame)
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 Viral_helicase1 AAA_19 DEAD AAA_22 AAA_16 ResIII nSTAND3 AAA RuvB_N UvrD-helicase AAA_25 UvrD_C_2 PIF1 PhoH ABC_tran T2SSE ATPase AAA_7 Zot AAA_33 IstB_IS21 DUF2786
Other DBs
NCBI-GeneID: 105159733
NCBI-ProteinID: XP_011075212
UniProt: A0A6I9SZX2
Position
LG4:836302..844864
AA seq 683 aa
MFKRDFRLPSSYKDAVFISSRSATHTQEKSGKLEISNCGNNNKISNDKITLEQFVSRMAP
LIDMEKEAEISLSMNSGATRSLDSAQKKGSTILNLKCVDAQTGLMGKSLLEFQSNKGDVL
PPHKFGNHDVVVLKPNKSDLGSPPLGQGVVYRIKDSSITVAFDDIPEEGLNSPLRLEKVA
NEVTYRRMKETLIQLSKSVQKGPAADLVPVLFGERPPTVSKKDIKFTPVNSNLDNSQKDA
ISKALSSKDLFLLHGPPGTGKTTTVVEIILQEVKRGTKILACAASNIAVDNIVERLVPHR
VKLVRVGHPARLLPQVLESALDAQVLRGDNSALANDIRKEMKALNGKLLKAKDKNTKRDI
RRELKTLSKEERKRQQLAVTDVIKNADVVLTTLTGALSKKLDGFSFDLVIIDEAAQALEI
ACWIALLKGPRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLTDLYGDDVTSMLTVQYR
MHELIMNWSSEELYDGKIKAHSSVAAHTLYELEDVKKSSSAEPTLLLVDIAGCDMEEKKD
EEDSTLNEGEAAVAIAHARRLVESGVQAANIGIITPYAAQVVQLKMLKSKEDKLKDMEIS
TVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCIICDTETVSGDKF
LKRLIEYFEEHGEYLSASEYGTE
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgtttaaacgcgacttcaggctgccgtcctcgtataaagacgccgtctttatttcaagt
cgctccgcaacacacacacaggaaaagagtgggaagttggaaatcagcaactgcggcaac
aacaacaaaatttcaaatgataaaattaccctcgaacagtttgtctccagaatggcccct
cttattgacatggaaaaagaagcagagatatcactctcaatgaattcgggggcgactagg
agtttggacagtgcacaaaaaaaggggtccactattcttaatttgaagtgtgtggatgct
cagacaggattaatgggcaaaagtcttcttgagtttcagtctaataaaggggatgtcctc
cctcctcacaagtttggaaatcatgatgttgtggttttgaaaccaaacaaatctgatttg
ggctctcctcctctcgggcagggtgttgtttacagaataaaggactcgtctattactgtt
gcttttgatgatataccagaagagggtttgaatagtcctttacgccttgaaaaagtggca
aatgaggtaacatatcgtcggatgaaggaaacattgattcagctaagtaaaagcgtgcag
aagggtcctgctgccgatctggttcctgtgttatttggggagaggccaccgacagtgtcc
aagaaggatatcaagttcactcccgtaaactcgaaccttgataattcacagaaagatgct
atatccaaggctctgtcgtccaaggacctctttttgctccatgggccgccaggaactggg
aagactacaacagtggttgaaattatcttacaagaagtcaagcggggaacaaaaattctt
gcttgcgctgcttccaatattgcagttgataacattgtggagagacttgtacctcataga
gtcaagttggtaagagtggggcatcctgcgcgcttacttcctcaagtattggagagtgct
ttggatgcacaggttctacgtggagataatagtgcgcttgcaaatgacattcgcaaggag
atgaaggctttgaatggcaagcttttaaaagccaaagataaaaatactaagagagatatt
agaagggagctgaagactctatccaaagaagagcggaaaaggcagcagctggcagtgacc
gatgtgattaagaatgcagatgtggtattaacaaccttgaccggtgcgctttccaagaag
ttggatggattttcattcgatttggttattattgatgaagctgcccaggcattagaaata
gcatgctggattgctctgctgaagggtccaagatgtatattggcaggtgaccatctccag
cttcccccaactattcaaagtgttgaagctgagaagaaaggattaggaagaaccctcttt
gaacgcctcacagatttatatggagatgatgtcacatctatgctcacagttcagtaccgc
atgcatgaacttataatgaactggtcatccgaagagctctatgatggcaagattaaagcc
cattcaagtgttgctgcccatactttatacgagcttgaagatgtcaagaagtcatcttca
gcggaaccaacccttcttctcgtagacatagctggttgtgacatggaagagaagaaggat
gaagaagacagtaccctcaatgagggggaagctgctgtcgctatagcacatgccaggaga
ctagtggaaagtggagttcaagctgccaacataggaattattacaccttacgcagcacag
gtggtgcaactcaagatgttgaaaagcaaagaagacaagctaaaagatatggaaatatct
acagttgatggtttccaaggtcgcgagaaggaagcaattatcatttcaatggtccggtca
aactcaaagaaagaggttggctttttaagtgatcggaggagaatgaatgttgcagtgaca
cgagctaggagacaatgttgcattatttgtgacactgagactgtcagcggcgataaattc
ttgaagcgtttaattgagtactttgaggaacatggtgaatatttgagcgcttcagagtat
ggtactgaatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (26)   
   Pfam (26)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system