KEGG   Sesamum indicum (sesame): 105171074
Entry
105171074         CDS       T04135                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sind  Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:sind00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105171074
Spliceosome [BR:sind03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    105171074
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    105171074
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 105171074
NCBI-ProteinID: XP_011090388
UniProt: A0A6I9U904
Position
LG9:complement(7850050..7855351)
AA seq 858 aa
MARRHSSSSSDSEELEKEVRHHRERRREKNDDESREKAGRRREEEGNHGSRDSNPGRDSG
RDDMRLRNERDDEINENGHRSRKDDGGRERKLRHDEAGGEDYRKAERRRHRDYGGEDDKI
DHKERDGKREADDENNRKAERRGHRDYGGEDDKIGHKERDGERDSYPDTKRDRRDRDRRS
EWGREGDDERAEYRAREDHYKKYDSRDDDRKERRRDRERERDRRNKDDDKDKRRREKNTN
GSEVENTGLNKKGDGNDVPKVIKPVGNVAVDEVANLGRSGGVYIPPFKLARMMKDIQDKN
SVEYQRMTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPG
FTDVFAALVAVVNTKFPEVGDLLLRRIILQLQRAYKRNDKPQLLAAVKFIAHLVNQQVVH
ELIALELLTLLLEKPTDDSVEVAVGFVTECGSMLQDLSPRGLHGIFERFRGILHEGEIDK
RVQFLIEGLFALRKAKFQGYPAVRPELDLVEQEDQLTHEVSLLDEIDPEITLDIFKPDPQ
FPDNEKRYEELKKQILGEESDDDADSDADADADSDDEDDEESEDEEEEEQMKIKDETETN
LINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLG
QRFCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLT
EEDTTSSSRIFIKILFQELSEHLGIRLLNERLSDPAMQDSFESIFPRDNPKNTRFSINFF
TSIGLGGITENLREYLKNMPRLIMQQQKAAPESASESGSSSSDSEGSGSESGSSSSESSD
SESETDSEDRRRKKRRRN
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggctcggaggcattctagcagcagttcagacagcgaagaattggagaaagaagtcaga
caccacagggagaggaggagagaaaaaaacgatgatgaaagcagagaaaaagcgggtaga
aggagggaggaagaagggaaccatggaagtagggattcgaatccgggtcgagattctgga
agagatgatatgagattgagaaacgagcgagatgatgagattaatgagaatggacatagg
agtaggaaagacgacggtggtagggagagaaaattgcggcatgatgaagcgggtggtgag
gattatagaaaagctgaacggcggaggcacagagattatggtggtgaagatgataaaatt
gaccataaagaaagggatgggaagcgtgaagcagatgatgagaacaataggaaagctgaa
cggcgggggcacagagattatggtggtgaagatgataaaattggccataaagagagggat
ggggagcgggattcatatccagatacgaagagagacagacgggatagagaccgaagaagt
gagtggggacgtgagggtgatgatgagagagcggagtacagagccagggaggatcactat
aagaagtacgatagcagagacgatgataggaaagagcgacgaagggatagagagcgagaa
agagatagacgcaataaggatgatgataaagataagaggagaagagagaagaatacgaat
ggaagtgaagtagagaatacgggtttgaataaaaaaggagatggaaatgatgtcccaaaa
gtgataaagccggttgggaatgtggcagtagacgaggttgcaaatttggggaggagtggt
ggagtatatattccaccatttaagctagctagaatgatgaaagatatccaggacaaaaac
agcgttgagtatcaacgaatgacatgggatgctttgagaaagagtattaatgggttggtg
aataaagttaatgcaacgaacattaagaatatcatacctgagttgtttgctgagaacttg
atacgagggaggggtctattttgccggtcatgtatgaagtctcaaatggcttctccaggt
ttcactgatgtatttgcagcactggttgctgttgtaaacaccaaattccctgaagttggt
gatcttttgttgcgcaggataatactgcagcttcagagggcatataagcgcaatgataag
ccgcaactacttgctgcagtcaaattcattgcacacctggtgaaccagcaggttgtccac
gagcttattgctcttgagctgctgacattactgctggaaaagccaactgatgatagcgtt
gaagtggctgttggctttgttacagagtgtggaagcatgctccaggacctttctcctcga
ggactgcatggtatcttcgagcgatttcgtggaatccttcatgaaggagaaatagataaa
cgtgttcagtttttaattgaaggcctctttgcactgcgaaaagctaagttccaggggtat
cctgctgttcgtccggagttggatctagtggagcaggaagaccaattgactcatgaagtc
tcccttcttgatgagatagatcctgagattactttagatatcttcaagccggatccccag
ttccccgataatgagaagcgatacgaagaactgaagaagcaaatactaggtgaagaatct
gatgatgatgcagattcagatgcagatgcagatgcagattcagatgatgaggatgatgaa
gagtctgaggatgaggaagaggaagaacagatgaaaataaaggatgagacagagacaaat
ttgatcaatcttcgaagaactatctatttgacaattatgtctagcgttgatttcgaggaa
gccgggcataaactattgaaaataaaactggagcccggccaggagatggaattatgtatt
atgctgttggagtgttgcagtcaggagagaacttacctccgctattatggacttcttggg
cagcggttttgtatgataaacaaggtttatcaggagaactttgagaagtgttttgttcag
cagtattcaatgatccaccgactggagactaataaactgcggaatgtggcgaagttcttc
gctcatttacttggcaccgacgcattgccttggcatgttttggcctatatacggttgact
gaagaggatacgacttcttcttcccgtattttcatcaaaattctcttccaggaattgtcg
gagcaccttggaattcgcttgcttaatgaacgtctcagcgatcctgccatgcaagactct
tttgagtctatttttcccagggataaccccaaaaacactaggttctccatcaacttcttc
acttcaattgggctcggcggtatcactgaaaacctacgtgagtatctaaagaatatgcct
aggctcatcatgcaacagcagaaggctgcccctgagtcagcttctgaatctggtagttca
agttctgattcggaaggctctggatctgaatctggatcatcaagttcagaatcgagcgat
agtgaaagcgagacggatagtgaagatagacgcagaaaaaagaggagaagaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (55)   

Download RDF
DBGET integrated database retrieval system