KEGG   Ruegeria sp. TM1040: TM1040_1953
Entry
TM1040_1953       CDS       T00359                                 
Name
(GenBank) Peptidase S1C Do
  KO
K04771  serine protease Do [EC:3.4.21.107]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit01503  Cationic antimicrobial peptide (CAMP) resistance
sit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TM1040_1953
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    TM1040_1953
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sit01002]
    TM1040_1953
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:sit03110]
    TM1040_1953
Enzymes [BR:sit01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.107  peptidase Do
     TM1040_1953
Peptidases and inhibitors [BR:sit01002]
 Serine peptidases
  Family S1: chymotrypsin family
   TM1040_1953
Chaperones and folding catalysts [BR:sit03110]
 Other chaperones and cochaperones
  DegP / HtrA
   TM1040_1953
SSDB
Motif
Pfam: Trypsin_2 PDZ_2 Trypsin PDZ_6 PDZ Peptidase_S46 Peptidase_S29 Peptidase_S7
Other DBs
NCBI-ProteinID: ABF64685
RoseoBase: TM1040_1953
UniProt: Q1GF81
Position
complement(2056616..2058115)
AA seq 499 aa
MHPISSSKAIGRARVHEGAHSGWRLFWISVLGTALLVMQSLSAAARPESLAPLAEKVSPA
VVNITTSTVVEGRTGPQGIVPEGSPFEDFFREFQDRNGGGTRPRRSSALGSGFVISEDGY
IVTNNHVIEGADEIEIEFFPGEGQPADLLPATVVGTDPNTDIALLKVDAPMPLSFVKFGD
SDKARVGDWVVAMGNPLGQGFSLSAGIVSARNRALSGSYDDYIQTDAAINRGNSGGPLFN
MDGEVVGVNTAILSPNGGSIGIGFSMASNVVTKVVSQLKEFGETRRGWLGVRIQDVTDDL
AEAIGLASDEGVLITDVPEGPAKEAGLLARDVITSFDGFEVKDTRDLVRRVGDTEVGKTV
RVVVFRDGKTETIRVTLGRREDAVGNGTEGGGAEAVPDEGEKELLGLTVGVVRDDMREDL
NLDAGTTGLVILSVDETSGAWEKGLRAGDVITEAGQNKLSSIADLEAQIAAAEEGGRKSI
FLMVRRAGEPRFVALNLED
NT seq 1500 nt   +upstreamnt  +downstreamnt
gtgcatccaatctcatcatccaaggcaataggccgtgcgcgcgtccatgagggggcgcac
agcggctggcgcttgttctggatcagcgtcctcgggaccgcgctgttggtcatgcagtcg
ctttcggcggcggcccgtcccgaaagcctcgcgccactggccgaaaaagtcagcccggcg
gtggtcaatatcaccacgtcgaccgtggtcgagggccgcactggcccgcaggggatcgtg
cccgagggctccccgtttgaggatttctttcgcgagttccaggaccgcaacggcggcggc
acgcggccacgtcgttcctcggcgcttggctcggggttcgtgatctcggaagacggctac
atcgtcaccaacaaccatgtgatcgagggggctgacgagatcgaaatcgagttcttcccc
ggtgaaggccagcctgctgacctgctgccagccactgttgttggcaccgatcccaacacc
gatattgcgctgttgaaagtggacgcgccgatgccgctgagctttgtgaagttcggtgac
agcgacaaggcgcgcgtgggcgactgggttgtcgccatgggtaacccgctggggcaggga
ttttcgctctcggcagggatcgtatctgcacgcaaccgggcgctttcgggctcttatgac
gactacattcagaccgatgcggccatcaaccgtggcaactcgggcggtccactctttaac
atggatggcgaagtcgttggcgtgaacaccgcaatcctgtcgccgaacggcggctccatc
gggatcggcttctccatggcgtcaaatgtagtgaccaaagtggtgagccagctcaaggag
ttcggggaaacccgccggggttggcttggcgtgcgcattcaggacgtcaccgatgatctg
gccgaagcgatcgggctggcgagcgacgaaggtgtgctgatcaccgatgtccccgaaggt
cccgccaaagaggctggtctcctggcacgcgacgtcatcaccagctttgacgggtttgag
gtgaaagacacccgcgatctcgtgcgtcgcgtgggcgacaccgaagtcggcaagaccgtg
cgtgtcgtggtgttccgcgatggcaaaaccgagacgatccgcgtcacgctgggacgtcgc
gaagatgcggtgggcaacggcaccgaaggtggcggcgctgaagccgttccggatgaaggc
gaaaaagagctcctcgggctgaccgtgggcgttgtgcgcgacgacatgcgcgaggatctg
aacctcgatgcgggcaccactggtctggtgatcctctccgtggatgagacctctggcgcg
tgggaaaaaggtctgcgtgcaggcgacgtgatcactgaggcaggccagaacaagctctct
tcgattgccgatctcgaagcgcagatcgccgctgccgaagaaggcggccgcaaatcgatc
ttcctgatggtgcgccgtgctggtgagccgcgctttgtcgcgctcaatcttgaggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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