KEGG   Ruegeria sp. TM1040: TM1040_2147
Entry
TM1040_2147       CDS       T00359                                 
Name
(GenBank) sarcosine oxidase beta subunit family
  KO
K22084  methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00680  Methane metabolism
sit01100  Metabolic pathways
sit01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    TM1040_2147
Enzymes [BR:sit01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.99  With unknown physiological acceptors
    1.5.99.5  methylglutamate dehydrogenase
     TM1040_2147
SSDB
Motif
Pfam: DAO FAD_binding_2 Thi4 Pyr_redox_2 NAD_binding_8 FAD_binding_3 Pyr_redox_3 Trp_halogenase MCRA FAD_oxidored NAD_binding_9 PUL
Other DBs
NCBI-ProteinID: ABF64879
RoseoBase: TM1040_2147
UniProt: Q1GEN7
Position
complement(2254116..2255420)
AA seq 434 aa
MLHIVETPFEEWAMGFSEKFSGWRVLKEGLTGNKGWTAHWRDPEPKREYDVVIVGGGGHG
LATAYYLAKTHGLRNIAVLEKGYLGGGNVGRNTTIVRANYYLPGNSEFYSHSLKLWEGME
QDLNYNAMMSQRGILNVFHNDGQRDAAVRRANSIINQGDDAEILYRDQLKKLVPFLNYDN
NRFPIMGALLQRRAGTARHDAVAWGFARGADQYGVDLIQNCEVTGIDVDGGKVTGVQTVR
GPIKAKKVALAAAGRSSQVAAMAGLTLPIESHVLQAFVSEGLKPVIDHVITFAAGHLYIS
QSDKGGLVFGSYLDFYSSYAARGNLAMQEHTMEAITAMVPAVTKARLLRSWGGIMDMTPD
GSPIIDVTPIDGLYLNAGWCYGGFKATPASGDCFAHLIATGRPHEAATRFRLDRFRSGFG
LMDEEGTGAQHNLH
NT seq 1305 nt   +upstreamnt  +downstreamnt
gtgctgcacatcgtcgagacaccgtttgaggagtgggccatggggttttcggaaaagttt
tccggctggcgcgttttgaaagaggggctgaccggcaacaaaggctggaccgctcattgg
cgcgacccggaacccaagcgcgaatatgacgtggtcatcgtcggtggaggtgggcacggg
ctggctacggcttattacctcgccaagactcacgggcttaggaatattgcggttcttgaa
aagggctaccttggcggcggcaatgtcgggcgcaacacaaccatcgtgcgcgccaactat
tatctgcccggcaattcggagttttattcccattctctgaagctctgggaggggatggag
caggatctcaactacaacgccatgatgtcccagcgcggcatcctgaatgtgtttcacaac
gacggtcagcgcgatgccgccgtgcgccgcgccaattccatcatcaatcagggtgacgat
gcagagatcctctatcgcgatcagctgaaaaagctggtgccgttcctgaactacgacaac
aaccgctttcccatcatgggcgcattgctgcagcgccgcgcggggacggcacgccatgac
gcggtggcctggggctttgcgcgtggcgcagatcaatacggtgtcgatctgatccagaat
tgcgaagtaaccggcattgatgtcgatggcggaaaggtcaccggcgtgcaaacagtgcgc
ggcccgattaaggccaagaaggttgcattggcggcggcggggcggtcaagccaggtagcg
gcgatggcggggctgacgctgcccatcgagagccatgtgttgcaggcttttgtgagcgaa
gggctgaagccggtgatcgaccatgtgatcacctttgcggcagggcatctctatatcagc
cagtccgacaagggcggtctggtgtttggcagctatctggatttttacagctcctatgcg
gcgcgggggaacctagcgatgcaggaacatacgatggaggcgatcaccgccatggtgccc
gccgtcaccaaggcgcgtctgttgcgcagctggggcggcatcatggatatgacgccggat
ggctcgcccatcattgatgtgacgccgattgatggtctctatctcaatgcaggctggtgc
tatggcggctttaaggcgacgcccgcctcgggggattgtttcgcgcatctgatcgctacc
ggtcgcccgcacgaggcggccacgcggttcaggctcgaccggttccgcagcggctttggt
ctgatggacgaggagggcaccggtgcgcaacataatctgcactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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