KEGG   Setaria italica (foxtail millet): 101769498
Entry
101769498         CDS       T02818                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14 isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101769498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101769498
   03009 Ribosome biogenesis [BR:sita03009]
    101769498
Enzymes [BR:sita01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101769498
Spliceosome [BR:sita03041]
 Complex A
  U1 snRNP components
   U1 related factors
    101769498
 Complex B
    101769498
Ribosome biogenesis [BR:sita03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    101769498
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C SWI2_SNF2
Other DBs
NCBI-GeneID: 101769498
NCBI-ProteinID: XP_004968355
UniProt: K3XFA8
Position
V:complement(10189131..10193953)
AA seq 668 aa
MASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVPASP
SQPPGYSRPEERARSSGPSESRSEAAVSRSQYVPPSDNRTRNDHAEPRSAAGANVSQSAQ
FTNQVSQAANGSQMSTEAYRAKHEITIVGNEAPAPFMTFQSTGFPSEILREVMQAGFSAP
TPIQAQSWPIALKGRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSREGPTVLVLSPTRE
LATQIQDEAIKFGKSSRISSTCLYGGAPKGPQLRELDRGADVVVATPGRLNDILEMNRVS
LRQVSYLVLDEADRMLDMGFEPQIRKIVKQIPSRRQTLMYTATWPKEVRKIASDLLVNPI
QVNIGNTDQLVANKSITQHVEVISHSEKSRRLDQILRSQEPGSKVIIFCSTKRMCDQLAR
NLSRQYGASAIHGDKSQAERDSVLSDFRSGRCPVLVATDVAARGLDIKDIRVVVNYDFPT
GVEDYVHRIGRTGRAGATGSAFTFFGDQDSKYASDLVKILEGADQSVPPQLKEMASRGGY
GGRSRRWASSDDSYGGQGYGGRRSTDSFNNSSFGNQAGGGSSFHSSFHNSTSGGQFGDTP
SFHGSSRNNQTGDNPSFPPSSSNNQSGDGLSFHERFYGPRGGDQSRTSNDGFRARSRSPS
KAVGVSNW
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggcgtccgcgccggcgtccaagggcccgcgatacgcgccgccagatccg
accctgcccaagccgtggagggcgctcatcgacggcaacactgggtacctctacttctgg
aacccggacaccaaggtcacccagtacgagcgccccgtcgcggctgtgcccgcctccccg
tcgcagccgcctggctactccaggcccgaggagagggcgaggagctccggaccttccgag
tcacgctcggaagctgcggtgagccgctcgcagtatgtgcccccttccgataacaggaca
aggaatgatcacgcagagccacgctctgcagctggagcgaatgtttcacagagtgctcag
ttcaccaatcaagtttctcaggctgccaatggaagccaaatgtcgacagaagcatatcgt
gctaagcatgagattactatcgttggcaacgaggcaccagcgcccttcatgacatttcaa
tccactggcttcccttcggagattctaagggaggtcatgcaagcaggattctctgcgcca
actcctatccaagctcagtcatggccaattgctctaaagggtcgtgatattgtagctgtg
gcgaagacaggttctggaaaaacactgggctatctcattccagggtttattcttctgaag
cgcctacagcataattcaagggaaggtccaacagtattagttttgtctccaaccagggaa
ttggcaacacaaattcaagatgaagcaatcaagtttggcaaatcttcaagaatatcttct
acgtgcttatatggaggtgctcctaaaggtcctcagctaagagagttggatcgtggtgct
gacgttgttgttgcaactcctgggagattgaacgacattttggaaatgaatagagtgagc
ctgcgtcaagtatcatatcttgtccttgatgaagctgaccgtatgcttgatatgggattt
gagccacaaataagaaaaattgtgaaacaaataccatctagacggcaaactcttatgtac
actgccacatggccaaaagaggtgagaaaaatagcgtcagatttactggttaacccaatt
caagttaacattgggaacactgatcagctggttgcaaataagtcaattactcagcacgtg
gaggttatctcacattcggagaaatcaagacgacttgatcagatcttgcgttcacaagag
cctgggtcgaaagttataatattttgctccaccaagaggatgtgtgatcagctggctcgg
aacttatcacgtcagtatggtgcttctgctattcatggtgataaatcacaggcggagagg
gattctgtgttgagtgacttccgaagtggcaggtgtcctgttcttgtagccacggatgtg
gccgctcgaggcttagacataaaggatatcagagtcgtggttaactatgatttcccaact
ggtgtggaggactatgtccacagaattggaaggacaggtagggcaggtgcaacaggatct
gccttcacattctttggtgaccaggactcaaagtatgcttcagaccttgtgaaaattttg
gagggggcagaccaatcagtgccaccacaattaaaagaaatggcttctcgtggaggatat
ggtggaagatcacgtcggtgggcatcttctgatgactcctatggtggtcagggatatggg
ggtagaagatcaacggacagcttcaataacagtagctttggcaatcaggctggtggtggt
tcaagctttcactcgagcttccataacagcacgagtggcggtcaatttggtgatactcct
agctttcatggcagcagccgcaacaatcagactggtgacaatccaagctttcctcccagc
tccagcaacaatcaatctggggatggtctcagctttcatgaaaggttctatggaccacgt
ggaggggatcaaagcagaacaagcaatgacggattccgtgctaggagcaggagtcctagc
aaggctgtgggagtttccaactggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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