KEGG   Setaria italica (foxtail millet): 101778884
Entry
101778884         CDS       T02818                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sita00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    101778884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sita04131]
    101778884
Membrane trafficking [BR:sita04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    101778884
SSDB
Motif
Pfam: Clathrin WD40 PROPPIN zf-RING_2 ANAPC4_WD40 PQQ_3
Other DBs
NCBI-GeneID: 101778884
NCBI-ProteinID: XP_004960100
UniProt: A0A368QAN6
Position
III:1024178..1031236
AA seq 950 aa
MSTERRAHPPLQNGAGGDDGDDEREEEDGDEGEEELEDEAEEEEEEPRLKYQRLGGSVPA
ILSTDAAASIAVADRMVALGTHNGTLHILDFQGNQVKEIAAHTATVNDISFDADGEYIGS
CSDDGTVAISSLFTDEKLKFEYHRPMKAIALDPNYSRNYRRFATGGLAGQVLVLTKKTWG
GYHKKVLRDGEGPIHSMKWRTDLLAWANDAGVKVHDMKTDKGIAFIERPKGIPRPEFLLP
HLVWQDDTVLVIGWGTSVKIAAIRTDSSQGLNGIQRTIAAVGSEKYVDIVGSFQTGYHIS
GIAPFGDLLVVLAYIPDEDEKEKKISTSVTSRQGTAQRPEIHLVSWKNDEVTTDALPIHG
YEHYKAKDYALAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDIVVAKPRDAEDHIAWLLQH
DCHEKALAAVEAGQGPTELLDEVGSRYLDHLIIERKYAEAAQRCPKLLRGSPSAWERWVF
HFAHLRQLPVLVPYIPTENPQLSDTAYEVALVALTTNPSFHELLLTTVKNWPPTLYSASP
VISAIEPQLDSSSMTDTLKEALAELYVINSQYEKALSLYAELLKPEVFEFIEKYNLHDAI
RDKVVNLMILDSKRTVHLLIQHRDIIPPYEVVEQLLHTNKKCDKRHFLHLYLHALFEIDI
HAGKDFHDMQVELYADYEQRMLLPFLRTSQHYRLDKAYEIFAQRELVREQVFVLGRMGNA
KEALSTIINKLENIEEAVEFVMDQHDDELWDELIRQCLQKPEMVGMLLEHTVGNLDPLYI
VSLVPDGLEIPRLRDRLVKIVTDYRTETSLRNGCNDILKADCVNLLVKYYHEARRGVYMA
SMDEEVHGNRVDDGSSRANERSSSVRALDIKSRTRCGARCCLCFDPLPIQDISVILFYCC
HAYHLSCLEGGLDLMRSNSNQDTDNGSDDEDGSPSGESRMRCVLCTTASA
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgtccaccgagcggcgcgcccacccgccgctgcagaacggcgcggggggagacgacggg
gacgacgagcgggaggaggaggacggcgacgagggggaggaggaattggaggatgaggcg
gaggaggaggaggaggagccgcggctcaagtaccagcggctgggcgggagcgtgccggcg
atcctctccaccgacgccgccgcgtccatcgccgtcgccgaccgcatggtcgcgctcggc
acccacaacggcaccctccacatcctcgacttccagggcaatcaggtgaaggaaattgct
gcccacacggcaactgtcaatgacatcagctttgacgcagacggtgaatatataggcagc
tgctcagatgatggcacagtagcaataagcagcctcttcactgatgaaaaactgaagttt
gagtaccatcgccccatgaaagcaattgctctagaccctaattattcccggaactatagg
agatttgctactggtggtttagcaggtcaagtacttgtgttgacaaagaagacttggggt
ggttaccataagaaggttttgcgtgatggcgaagggccaatccattctatgaagtggaga
acagacctacttgcttgggctaacgatgcaggggtgaaagtgcatgatatgaaaacagac
aaaggaattgcattcatagagcgaccgaaaggcattcctcggccagagttcttacttccc
cacctagtatggcaggatgatactgtcttagttattggatggggaacaagtgtcaagatt
gcagcaattcgaacagattcatctcagggactcaatggcatacaaaggaccatcgctgca
gtgggttccgagaagtatgtagatattgttggttcattccaaacaggctaccacatatct
gggattgctccttttggtgaccttttagttgtgctcgcctatattcccgatgaggatgaa
aaagagaaaaaaattagtacttctgttacttcacgacagggaactgcacagcgtcctgaa
atacatcttgtgtcatggaaaaatgatgaagttactacagatgctctgcctattcatggt
tatgaacattacaaggcaaaagattatgctcttgcgcatgcacctttctcaggaagtagc
aatgcaggtggacagtgggctgctggcgacgaacctttgtattacatcgtgtctcctaag
gatattgtggtggcgaaaccaagagatgctgaagatcatattgcttggcttcttcaacat
gattgtcacgaaaaagcattggctgctgttgaggcagggcaagggccgactgagcttctt
gatgaggttggttcaagataccttgaccacttgataattgaaagaaaatatgctgaagct
gctcaacgctgtccaaagttgctgcgaggatctccttcagcatgggagagatgggtcttt
cactttgctcatctccgccaacttcctgttttggtcccatatatacctacagaaaatcct
cagctgagtgatactgcatatgaggttgcccttgttgctctaactaccaatccttctttc
catgaacttctgctgaccactgtaaaaaattggccacctacactgtactcagcttcacct
gtcatatctgccattgagccacagctcgactcatcatcgatgactgatacattgaaagag
gcgttagctgagttgtatgtaatcaatagtcaatatgaaaaggcactttccctgtatgct
gaactcctgaagccagaagtattcgagtttattgaaaagtacaacttgcatgatgccatt
cgtgataaggtcgtcaatcttatgatactggatagtaaaagaacagttcacctactgatc
caacatcgtgatatcattcccccatatgaagttgtggagcagttgttgcataccaataaa
aaatgtgacaagagacattttttgcacctatatttgcatgctctatttgagatagatata
catgctggaaaagattttcatgatatgcaggtggagctttatgcagactatgagcaaagg
atgctactacccttcctccgtactagtcagcattacaggcttgacaaggcatatgaaatc
tttgcacaaagggaacttgtaagggaacaggtttttgtccttggtcgaatgggcaatgct
aaagaagctctttcaacaatcataaacaaactggaaaacatagaggaggctgttgaattt
gttatggaccaacatgatgacgaactatgggatgaactgattagacagtgcctccagaag
cctgaaatggttgggatgctattggaacatactgttggcaatcttgatcctctgtacatt
gtcagtttggttcctgatgggttagaaatacctcggttgcgggatcggcttgtgaaaatt
gtgacggactaccggacggaaacttcactgcgaaatggatgcaacgatatacttaaggct
gactgtgtgaaccttttggttaaatactaccacgaggctcggcgtggagtttacatggca
agcatggacgaggaggtacatggaaacagggttgatgatggatcatcgcgagcaaatgag
agatcatccagtgttcgggctctagatattaagtccagaacgagatgtggtgcccggtgt
tgcttatgcttcgatcctttgccaattcaggacatatccgtcattttgttctactgctgc
catgcgtatcatctatcttgcttggaaggtgggttggacttaatgagatcaaacagtaat
caggatactgacaatggctcagacgacgaggatggttccccgtctggtgagtctcgtatg
cgctgtgtattgtgcactactgcctctgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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