KEGG   Shewanella japonica: SJ2017_1354
Entry
SJ2017_1354       CDS       T04959                                 
Name
(GenBank) SAM-dependent methyltransferase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
sja  Shewanella japonica
Brite
KEGG Orthology (KO) [BR:sja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sja03009]
    SJ2017_1354
Enzymes [BR:sja01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     SJ2017_1354
Ribosome biogenesis [BR:sja03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SJ2017_1354
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltransf_31 Ubie_methyltran Methyltransf_32 Methyltransf_25 Tho1_MOS11_C
Other DBs
NCBI-ProteinID: ARD21678
Position
complement(1597021..1598385)
AA seq 454 aa
MPVAPQSNLIATTPAQKRALSYSTTIKMLFDEVLDTKMPADRIVANYFREHKKHGSKDRR
VIRETLFGLFRWWGWLKQIGSQHDEQTWFAMLSSCALLEQHMWRNFAEAWQHFAQLSPEQ
LAVIDEHVEATGEANTYTVIEKSLLLNNVFTGKTVKPSQLLPDWYWEVCPIESAEQQLKL
VEAMSSRPPIWARVQKLATDKAVSQLQQDGIDASLCEYFGDAISLGSKSINLNDVKLYKN
GQVEIQDLASQVIGNVCKPKANEQWWDTCSGAGGKTLQLRSLMLQDVENNSTGSITSSDI
RTKALEELNKRAKRAGFDGITIAKWKSDNLPVSESYLDGVLVDAPCSCTGTWRRNPDMRW
IDDRSCVDDKPALQLDILSRSAKAVKTGSHLVYATCSLSPLENEAVVDAFLSNNKDFSLV
VSTHPFTEQQSEHITVWPYEANSDGMYVAKMVKK
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgccagtagcaccacaatcaaaccttatcgccaccactccagcacaaaaacgtgctttg
agctattcaaccaccatcaaaatgttatttgatgaagtgttagatactaaaatgcccgct
gaccgaatcgtggctaattactttcgtgaacacaaaaagcatggttcaaaagatcgcaga
gtcattcgcgaaacgttattcggcctatttcgttggtggggctggcttaaacaaataggc
tcacaacacgatgagcaaacttggttcgcaatgctcagtagctgtgcactgttagagcaa
cacatgtggcgtaattttgcggaagcttggcaacattttgctcagctatcaccagagcaa
ttagcggtgatagatgaacatgtcgaagccacaggcgaagcgaatacttacactgttatt
gaaaagagtctgttactcaataatgtatttactgggaaaaccgttaagccaagtcaacta
ttaccagactggtattgggaggtttgcccgattgagtcagctgagcaacaacttaaactc
gttgaggcaatgagctctcgaccgcctatttgggcaagggtgcaaaaattagccacagat
aaagcagtatcccaattacaacaagatggcatagatgcaagcttgtgcgaatactttggt
gatgccattagtttaggcagtaaaagtattaacttaaatgacgtaaaactgtataaaaat
ggccaagttgaaattcaagatcttgcatctcaagttattggcaatgtgtgtaagcccaaa
gcaaatgagcaatggtgggacacgtgcagtggcgctggcggcaagaccttacaacttcgt
tcacttatgctgcaagacgttgaaaataattcaacagggtcgattacctcatcagacatt
cgtacaaaagcactagaagagttaaacaagcgcgctaaacgagcaggttttgatggcatt
acaatcgctaaatggaagtctgacaatttacctgtctcagagagctaccttgatggtgta
ttagtcgatgcaccttgtagctgcactggtacttggcgcagaaatcctgacatgcgctgg
attgatgatagaagttgtgtggatgataaacctgccttgcaattagacatattgagtcgt
agtgctaaagccgtaaaaacaggctctcatcttgtttacgctacttgttcattatcacct
ttagagaacgaagccgttgtagacgcatttttatctaacaataaagacttcagtttagta
gtaagcactcacccttttacagagcagcaaagtgagcatattaccgtatggccatatgaa
gcaaacagcgatggaatgtatgtcgcgaagatggttaagaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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