KEGG   Sphingobium indicum UT26S: SJA_C1-20560
Entry
SJA_C1-20560      CDS       T01201                                 
Symbol
miaB
Name
(GenBank) bifunctional enzyme involved in thiolation and methylation of tRNA
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
sjp  Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sjp03016]
    SJA_C1-20560 (miaB)
Enzymes [BR:sjp01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     SJA_C1-20560 (miaB)
Transfer RNA biogenesis [BR:sjp03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    SJA_C1-20560 (miaB)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM
Other DBs
NCBI-ProteinID: BAI96890
NITE: SJA_C1-20560
UniProt: D4Z2Q8
Position
1:2051381..2052730
AA seq 449 aa
MNRYDAQKTPATFHVKSFGCQMNVYDGERMAELLGERGMTAAADGAEADLVILNTCHIRE
KAVDKVYSDIGRMTREDGSRPMIAVAGCVAQAEGGEIQRRARNVDIVVGPQAYHRLPDLI
DRAGRGEQAVDTDMPLASKFGALPSRSRQARPTAFLTIMEGCDKFCTYCVVPYTRGAEIS
RSWSAILDEAKALVDGGVGEITLLGQNVNAWTGEDDKGRMQGMDGLVRELAKIDALKRIR
YTTSHPNDMSDGLIAAHGDEAKLMPFLHLPVQSGNDRVLKAMNRSHSADSYLRIIERVRA
ARPDIALSGDFIVGFPGETDAEFEDTLKIVEQVRYAQCYSFKYSPRPGTPAADMDGQIPA
EVMDERLARLQSLINRHQAEFNAATVGRRTDILLERKGRHPGQLIGKTPWLQSVHVTAPE
LSIGDMVEVDIISAGPNSLAGQPSRRKAA
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgaatcggtacgacgcccaaaagactccagcgacattccacgtcaaatccttcggctgc
cagatgaacgtctatgatggcgagcgcatggccgaactgctgggcgagcgcggcatgaca
gccgcggccgacggggccgaggcggatctggtcatcctcaacacctgccacatccgcgaa
aaggcggtggacaaggtctattccgacatcggccgaatgacccgcgaggacggcagccgc
ccgatgatcgcggtcgccggctgcgtcgcgcaggcggagggcggcgaaatccagcgccgc
gcccgcaatgtcgacatcgtcgtcggaccgcaggcctatcaccgcctgcccgacctgatc
gaccgggcgggtcgcggcgagcaggccgtcgacaccgacatgccgctggcatccaagttc
ggcgccctgccctcgcggtccaggcaggcgcggcccaccgctttcctgacgatcatggag
ggctgcgacaaattctgcacctattgcgtggtgccctatacgcgcggcgcggagatcagc
cgaagctggtccgccatcctggacgaagcgaaggcgctggtcgacggcggcgtgggggag
atcacgctgctgggccagaacgtcaacgcctggaccggcgaggacgacaagggccggatg
cagggcatggacggcctggtccgcgaactggcgaagatcgacgcgctcaaacgcatccgc
tacaccaccagccatcccaacgacatgagcgacgggctgatcgccgcccatggcgacgag
gccaagctgatgcccttcctccatttgccggtgcaatcgggcaacgaccgggtgctgaag
gcaatgaaccgcagccacagcgccgacagctatctgcgcatcatcgaacgcgtgcgcgcg
gcgcggccggacatcgcgctctccggcgacttcatcgtcggctttcccggcgaaaccgac
gccgagttcgaggatacgctgaagatcgtggagcaggtccgctacgcgcaatgctacagc
ttcaaatacagcccgcgtcccggcacgcccgccgccgacatggacgggcagatcccggcg
gaggtcatggacgagcggctcgcccggctccagtcgctgatcaaccgccaccaggcggaa
ttcaacgcggccaccgtcggccgccgcacggacatcctgctggagcgcaagggccgccat
cccggccagctcatcggcaagacgccctggctccagtccgtccacgtcaccgccccggaa
ctttccatcggggacatggtagaagtcgatatcatcagcgccggtccgaacagtctggcc
ggccaacccagcaggaggaaggccgcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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