KEGG   Sphingobium indicum UT26S: SJA_C1-27430
Entry
SJA_C1-27430      CDS       T01201                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp03030  DNA replication
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SJA_C1-27430 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sjp03032]
    SJA_C1-27430 (rnhB)
Enzymes [BR:sjp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     SJA_C1-27430 (rnhB)
DNA replication proteins [BR:sjp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     SJA_C1-27430 (rnhB)
   Elongation factors (archaeal)
     SJA_C1-27430 (rnhB)
SSDB
Motif
Pfam: RNase_HII Carn_acyltransf MGTL
Other DBs
NCBI-ProteinID: BAI97577
NITE: SJA_C1-27430
UniProt: D4Z4P5
Position
1:complement(2748102..2748701)
AA seq 199 aa
MPDFAHELLHHPGLVAGVDEAGRGPLAGPVVAAAVILRQEDCPEGLNDSKQLSAARRAVL
EGEIKARALCWGLGVASVEEIDSINILWATMLAMTRAVEALAHDCAHVLVDGNRCPQWRW
ASTAIVEGDAKCLSIAAASILAKEARDRMMVEAAATHPHYGWESNKGYGSARHLAALREH
GPTPLHRRSFAPVAQLSLL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgcctgatttcgcccatgaactgctgcaccatccggggctggtggccggggtggacgag
gccgggcgcgggccgttggccgggccggtcgtggcggcggcggtgatcctgcggcaggag
gactgccccgaaggcctcaacgactccaagcaattgagcgcggcccggcgcgccgtgctg
gagggggagatcaaggcgcgggcgctgtgctgggggctgggggtcgcctcggtcgaggag
atcgacagcatcaacatcctctgggcgacgatgctggcgatgacgcgggcggtcgaggcg
ctggcccatgattgcgcgcatgtgctggtggacggcaatcgctgcccgcaatggcgctgg
gcgtcgaccgccatcgtcgagggggacgccaaatgcctgtccatcgcggcggcatccatc
ctggccaaggaggcgcgcgaccggatgatggtggaggcggcggcgacgcatccccattat
ggctgggaaagcaacaagggctatggcagcgccaggcatctcgcggcgctgcgggaacat
ggtccgacgccgctgcatcgcaggagctttgcgccggtggcgcagttgagtttgctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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