KEGG   Sphingobium indicum UT26S: SJA_C1-32910
Entry
SJA_C1-32910      CDS       T01201                                 
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
sjp  Sphingobium indicum UT26S
Pathway
sjp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SJA_C1-32910 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sjp01007]
    SJA_C1-32910 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sjp03016]
    SJA_C1-32910 (aspS)
   03029 Mitochondrial biogenesis [BR:sjp03029]
    SJA_C1-32910 (aspS)
Enzymes [BR:sjp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     SJA_C1-32910 (aspS)
Amino acid related enzymes [BR:sjp01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   SJA_C1-32910 (aspS)
Transfer RNA biogenesis [BR:sjp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SJA_C1-32910 (aspS)
 Prokaryotic type
   Other AARSs
    SJA_C1-32910 (aspS)
Mitochondrial biogenesis [BR:sjp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SJA_C1-32910 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon GAD
Other DBs
NCBI-ProteinID: BAI98125
NITE: SJA_C1-32910
UniProt: D4Z693
Position
1:complement(3277031..3278815)
AA seq 594 aa
MHAYRTHTCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFQ
VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY
PEDIRLRYRFLDLRRETLHANIVKRTKIISDMRRRMEGAGFTEYSTPILTASSPEGARDF
LVPSRIHPGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVRQEDVWNTMEPVIAEVFEAFADGKPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL
ITDVTEHFHGSGFGIFASLVESGSVIRAIPAPGAGAGSRKFFDDMNNWARSEGYSGLGYI
NIKDGVPGGPIAKNHGEERTAKLIEALGLGPNDGVFFAAGKEGQAAKLAGLARIRVGEQL
DLIDRDRFELCWIVDFPFYEYDEDTKSIDFAHNPFSMPQGGLDALENQDPLSLKAYQYDM
VCNGYEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSPAEFKQLRELHIRVVEPQAKA
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcatgcctatcgcacccacacctgcggcgcccttacgacggcggaggtcggcaatgag
gtgcgggtgtccggttgggtgcaccgcaagcgggaccatggcgacctggtcttcatcgac
ctgcgcgatcattatggcatggtgcagatcgtcaccgaagtcgacgggccggtgttccag
gtgatcgaatcgctgcgggcggaaagcgtcgtgacggtgacgggcaaggtcgtcgcgcgg
gcgaaggaagcggtgaacccgaacctgcccaccggcgagatcgagattcgcgctctggac
gcggtggtgctgtccgccgccgccgacctgccgctgccggtcgcgggcgagcaggaatat
ccggaggacatccgcctgcgctatcgcttcctcgacctgcggcgcgagacgttgcacgcg
aacatcgtcaagcggaccaagatcatctccgacatgcgccgccgcatggaaggggcgggc
ttcaccgaatattcgacgccgatcctgaccgccagcagcccggaaggcgcgcgcgacttt
ctggtgcccagccgcatccatccggggaaattctacgccctgccgcaggcgccgcagcag
tacaagcagttgctgatggtcgcgggcttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaagacccccgcgccgaccggctgccgggcgaattctaccagcttgacctggaa
atgagcttcgtgcgccaggaagatgtctggaacacgatggagccggtgatcgctgaggtg
ttcgaggcctttgccgacggcaagcccgtgaccccggcgggcagcttcccgcgcatcccc
catgccgaggcgatgctgaaatatgggtcggacaagcccgacctgcgcaacccgatcctt
atcaccgacgtcaccgaacatttccatggcagcggcttcggcatcttcgcgtcgctggtg
gagagcggcagcgtgatccgcgccatcccggcgccgggcgctggtgcgggcagccgcaaa
ttcttcgacgacatgaacaattgggcgcgcagcgaaggctattcgggcctgggctatatc
aacatcaaggacggcgtgcccggcggccccatcgccaaaaatcatggcgaggaacggacg
gccaagctgatcgaggcgctgggcctggggccgaacgacggcgtgttcttcgcggcgggc
aaggaaggccaggcggcgaagctggcgggcctggcgcggattcgcgtgggcgagcagctc
gacctgatcgacagggatcgcttcgaactgtgctggatcgtcgacttccccttctacgaa
tatgacgaggacaccaagtccatcgacttcgcgcacaaccccttctccatgccgcagggg
gggctggacgcgctggagaatcaggatccgctgagcctgaaggcctatcagtatgacatg
gtctgcaacggctatgagatcgcttcgggctcgatccgcaaccagtcgccggaactgatg
gtcaaggcgttcgagaaggtgggcctcagccaggcggacgtggaggagcgcttcggcggc
ctctaccgcgccttccaatatggcgcgccgccccatggcggcatggcggcgggcgtggac
cgcatcgtgatgctgctctgcggggcgcagaatctgcgcgagatcacgctgttcccgatg
aaccagcgggccgaagacctgctgatgggcgcgcccagcccggcggagttcaagcagttg
cgcgaactgcatatccgggtcgtggagccgcaggccaaggcctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system