KEGG   Saccoglossus kowalevskii (acorn worm): 100369166
Entry
100369166         CDS       T04123                                 
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03030  DNA replication
sko03410  Base excision repair
sko03420  Nucleotide excision repair
sko03430  Mismatch repair
sko03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100369166
   03410 Base excision repair
    100369166
   03420 Nucleotide excision repair
    100369166
   03430 Mismatch repair
    100369166
   03440 Homologous recombination
    100369166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sko03032]
    100369166
   03400 DNA repair and recombination proteins [BR:sko03400]
    100369166
Enzymes [BR:sko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100369166
DNA replication proteins [BR:sko03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    100369166
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      100369166
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     100369166
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_exo2 divDNApol
Other DBs
NCBI-GeneID: 100369166
NCBI-ProteinID: XP_006813424
Position
Un
AA seq 929 aa
MDGKRKAGTAFAAARKRSKVDTEDEPSAFEEELASLEKEESEKSQSQGSTNGNSTLSTES
FTDNKWGRPPAPLLNEKTDNIIFQQIDVDHYLGQPLKGMPGSTIGPVPIVRMFGITEEGN
SVLCHIHGFSPYFYVPAPKDFKSEHCRMFLEKLNQAVIQDMRSNKDNISHAVLAVDPCVK
ESIYGFHENRKLPFLKITVALPKLIAPAKRILETGGLQIPPYSNKGYQSYESNIDFEIRF
MVDADVVGCNWVEVPAGSYQLRKKNECSSCCQIEVDVAWDKFISHPPEGEWQKMAPFRIL
SFDIECAGRKGIFPEPEKDPVIQISNMVIRQGEKIPFIRNVYTLKSCAPVVGSQVLSYEK
ESELLKEWCKFVQAVDPDIITGYNIQNFDIPYLLNRAAALKIQTFPFLGKVKDLRTTMRD
SKFQSKQMGAREMKVINIEGRIQLDLLLVRSPVLLIPFLSSDKYIKTPSGNYFVKNSVRK
GLLPEILENLLSARKKAKAELKKEEDPFRKKVLDGRQLALKISANSVYGFTGAQVGKLPC
LEISQSVTAFGRQMIEQSKQLVEDKYNVANGYAHDAKVIYGDTDSVMVKFGLPTVGESMD
IGKEAAEYISKHFPPPIKLEFEKVYFPYLLISKKRYAGLYFTRADVHDKMDCKGIETVRR
DNCPLVSNLINICLQKILIDRILTVQWDHAKQIISDLLCNRVDISQLVITKELTRLAMKT
KQVRIQLSNLMRKRDPGSAPNLGDRVPYVIIAGAKKAAAYTKSEDPIFVLENNVPIDTQY
YLENQLSKPLLRIFEPILGENKAESVLLKGAHTLTKTVVHSKVGGLSAFTKKRSACIGCK
ALLPKDGLAVCKHCEPREAELYQKEISNLSALEEKFSRLWTQCQRCQGSLHEDILCTSRD
CPIFYMRKKVQKDLADQDVIVRRFENSDW
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggacggaaaaagaaaagctggaactgcgtttgcggcagcaagaaaacggtcaaaagtt
gacactgaagatgaaccatctgcctttgaagaagagttagcttctttagaaaaagaggaa
tcagaaaaatcacaaagtcaaggatctactaatgggaattctactttgagtactgaatcc
tttactgacaacaaatggggaagaccgccagcgccactgttgaatgagaaaacagataat
atcatatttcaacagattgatgttgatcattacctaggtcaacctctgaaggggatgccc
ggctccacaataggaccagttccaatagtacgtatgtttgggattacagaagaaggcaat
agtgtactttgtcatatccatggcttctccccatacttctatgtgccagcaccaaaggat
ttcaaatctgaacactgtcgaatgtttcttgaaaagttgaaccaagctgtcatccaggac
atgagatctaacaaagataacatcagtcatgctgttctagcggtcgatccatgtgttaaa
gaaagtatttatggtttccatgaaaataggaaattaccatttctgaaaataactgtagca
ttgcctaaactaatagctcctgccaagaggatattagagactggtggacttcagattccc
ccatattcaaataaaggttaccaaagttacgagagtaatattgattttgaaattagattc
atggtagatgcagatgtagttggctgtaattgggtagaggtaccagcaggatcgtatcaa
ttgcgaaaaaaaaatgaatgctcctcttgttgtcagattgaagtagatgtggcctgggat
aaattcataagtcatccaccagaaggagaatggcagaaaatggctccatttcgtattcta
agctttgatattgaatgtgctgggagaaaaggtatatttccggagcccgagaaagatcct
gtgatccagatatccaatatggttatacgacaaggagagaagattccttttattcgtaat
gtatatacattgaagtcgtgtgctccggtggttggatcgcaagtgttgtcttacgagaaa
gaatctgaattgttaaaagaatggtgcaagtttgtccaggccgttgacccagatatcatc
actgggtacaacatccagaactttgacattccatatctgctgaatcgagctgcggctttg
aagatccagacttttccatttctagggaaagtcaaagatttgaggacaacgatgcgagat
tcaaaatttcagtcaaagcagatgggagcaagagaaatgaaagtcattaatatagaaggc
aggatacagttagatcttttactggtaagaagtcctgtcctattaatacctttcttatcc
tccgataagtatattaaaacaccatctggtaattattttgtgaagaactctgtacgtaaa
ggcttgctgccagaaatccttgagaatttattatcagccagaaaaaaagccaaagctgaa
ctgaaaaaagaggaggacccctttcgtaaaaaggttttggatggtcgtcagctagctttg
aaaattagcgcaaactctgtgtatggtttcactggtgctcaagttggcaaactgccatgt
ttggaaatttcacagagtgttacagcattcggtcgacagatgatagaacagtcaaaacag
ctagtggaagataaatataatgttgccaatggttacgcacatgatgctaaggtcatatat
ggagatactgattcagtaatggtcaaatttggactacccactgttggtgaaagcatggat
attggaaaagaagctgccgaatacatctctaaacatttccctccaccgataaaattagaa
tttgaaaaggtgtactttccatatttgttaatcagtaaaaaaagatatgcaggactgtat
ttcactcgtgctgatgtccatgataaaatggactgcaaaggtatagaaacagtcagaaga
gacaactgccctctagtgtccaatcttataaatatatgtctacagaagattttaattgac
aggatcctgacggtgcagtgggatcatgctaaacaaatcatttctgatttactgtgtaac
cgagtagatatctcacagttagtcatcactaaagaattgaccagactggcaatgaagacg
aagcaagtcagaattcaactttctaatttgatgcgtaaacgagatccaggtagtgctcct
aatctaggtgacagggtaccgtatgttataatagctggtgccaagaaagctgcagcttat
acaaaatctgaggatcctatctttgtactagagaataacgtaccgatagacacacaatat
tatctggaaaaccagttaagcaaacctcttcttagaatatttgaaccaatccttggcgaa
aataaagctgaatcggttctactgaagggagctcacacattaactaaaactgttgtgcat
tctaaagttggtggcttgtcagcttttacaaaaaagcgaagtgcatgtattggatgcaaa
gctttgttacccaaggatggattagctgtgtgcaaacactgtgaaccaagagaggctgag
ctttatcaaaaagagatatctaatttaagtgctttggaagaaaagttctctagattgtgg
actcaatgtcagcgttgtcaaggtagtcttcatgaagatattttgtgcacaagtcgtgac
tgtccaatattttatatgcgcaaaaaggtccagaaagacttggcagaccaagatgtcatt
gtgcgaagatttgaaaattctgactggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (61)   

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