KEGG   Saccoglossus kowalevskii (acorn worm): 100373258
Entry
100373258         CDS       T04123                                 
Name
(RefSeq) exosome complex component RRP46-like
  KO
K12590  exosome complex component RRP46
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100373258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100373258
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100373258
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100373258
NCBI-ProteinID: XP_006814760
Position
Un
AA seq 190 aa
MTSQRADCGNLELRSQSCEQNLLSRPDGSATYCQGDTSVIVAVYGPAEVKQSKEFLDKAT
LEVIFKPKVGIPGCSEKFQERLIRNTCETIVLTALHPRSSINIIIQVMHNAGSLLSCCVN
STCMALLDAGLPMSCLVAAVTCSLSCDGDIILDPTSQQEKEAKAILTFVFESRDNEIITS
NTHGIYSIKQ
NT seq 570 nt   +upstreamnt  +downstreamnt
atgacttcccagagagctgattgtggtaatctcgaattaaggtcacaaagctgtgaacaa
aatttactttccagaccagatggttcagcaacttattgtcaaggtgacacatccgtaatt
gtggcagtgtacggtccagcagaagttaaacaaagtaaagaatttttagacaaagcaaca
ttggaagtgatatttaaacccaaggttgggattccaggatgcagtgaaaaatttcaagaa
agattaattcgtaatacttgtgagacaatcgtgttaactgccttacatcccagatcctcc
ataaatattattatacaagtaatgcacaatgctggatctttattatcatgttgtgtaaat
agtacatgtatggctttgctagacgctggtttaccaatgtcatgtttagtggctgcggtt
acgtgttcattaagttgtgatggggacattatattagatccaacaagccaacaagaaaag
gaggctaaggcaattttaacatttgtatttgaaagtcgggataatgaaatcattacatcc
aatacgcatggtatatactctataaaacag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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