KEGG   Saccoglossus kowalevskii (acorn worm): 100374123
Entry
100374123         CDS       T04123                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100374123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100374123
   03041 Spliceosome [BR:sko03041]
    100374123
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100374123
Spliceosome [BR:sko03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100374123
SSDB
Motif
Pfam: FmiP_Thoc5 DREPP RWD
Other DBs
NCBI-GeneID: 100374123
NCBI-ProteinID: XP_006818091
Position
Un
AA seq 675 aa
MSSSTSLSQKKTRRRTTRPLSDVSVSSKDPKKVKLSSYDKEFVYSEEREVDQRDPVKDQA
IFSAASNDIKKLMKEIYDMKMKGVKDNTGEMTARRIQSSLNFVTLKKLNRIAHIRSKKSK
DSTHESKQKVDSFHLQLQNLLYEAMHLQKEVTKCLEFTSMDEDIDLVDVSDFYEKAPGEI
SKPEKTNRDPHQLRLARLDWELEQRKRLAEKCKELETSKNIISKEIQTKRDYLDSLQPKL
NDVLQATVPLQMLSMPFEAIRLQHKTARHLTRPLYILYVQANAYHEACDADLTVSIVGDI
DTTLQDDGNSSAVEDDSDSDDEAITESKRRRRKTVDLLTEKRKRVLRKHPLAVVLKIKCE
DGSVLSLCFSYLSVLQIVTVGVQLTPAMDSVITTFSAGDLLSPNSLLSCLFPGDYGNDTP
NPANHFQLSKLGMDTFGAYITEVGHPYKWVQRICGLEFLENSKELRDPKAKSSVSSSHIE
TITKALRNNRHSIPVPSDCQSLFPAKLEGKFTGWKSLTYDDYMTLLYTQDTLEAELVNET
DIMFLAVFERGSAKLNAAIAVHPNYPSTPPLFRVNISWRGVHHAVNDHSIRMMENEVNVH
FDEFSEHGAYDYLLTNQLQRLMMCFDVYLEAESAFGTSAAPVEFAKEKVMPRLSRGPHRA
KPFKYNPQHGFFSHR
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgtcttcaagtacatcactttcacagaaaaaaacacgccgtagaacaacacgtccatta
agcgatgtatctgtcagttcgaaagatcccaagaaagtaaaattatcgtcctatgataag
gaatttgtatacagtgaagaaagagaagttgatcagagagatccagtaaaagaccaagca
atattttcagctgcttcaaatgatatcaagaaattaatgaaagaaatttatgatatgaag
atgaaaggtgttaaagataatactggcgagatgacggcaagacgaatccaatcatcttta
aattttgtgactcttaagaaattaaatcgcattgcacacatacgaagtaagaagtcaaaa
gattccacacatgaatccaaacagaaagtggacagtttccatctacagttgcagaatttg
ttgtatgaagcgatgcatctacagaaagaagttacaaagtgtttggaatttacttctatg
gatgaagatatagatcttgttgatgtgtcagacttctatgaaaaggcaccgggagaaata
tctaaacctgaaaaaacaaaccgagatcctcatcagttgagattagccagattagattgg
gaacttgaacagagaaaaaggttggctgagaaatgcaaagaacttgaaaccagtaagaat
ataatatctaaagagatacagacaaaaagagattatttggatagtttacaacctaaactg
aatgatgtacttcaggctacagttcccttacaaatgttgtctatgccatttgaagcaatc
aggttacagcacaagactgccaggcatttaacaagaccactatacatattatatgtccaa
gctaatgcttatcatgaggcgtgtgatgctgatttgacagtgagtattgtaggtgatata
gatacaacattacaagatgacggcaatagtagtgctgtggaagatgacagtgattcagat
gatgaggcaattactgaatcaaaaagaaggcggcgtaaaactgttgacctcttaacagag
aagcgaaaaagagttcttagaaagcatcccttagcagttgtattaaagatcaaatgtgaa
gatggatcagttcttagtttgtgttttagttacttatcagttttacaaatagttacagtg
ggtgtgcaattgacacccgctatggactctgtaatcaccacatttagtgcaggagactta
ctgtctccaaacagcttgttgtcttgtcttttccctggtgactatggtaacgacactccc
aatccagccaatcatttccagttgagcaagcttggaatggatacatttggtgcatacatc
acagaagttggtcatccctacaaatgggtacaaaggatatgtggtcttgaatttttagag
aatagtaaggagttaagagaccctaaagccaagtcgtctgtcagttctagtcacatagaa
actattactaaggcactacgaaacaatcgtcatagcattcctgtaccaagtgattgtcag
agtttattcccagctaaattggaaggcaagttcacaggttggaagtccttgacatacgat
gattacatgacactgttgtacactcaagacacattggaagctgagttagtgaatgaaaca
gacattatgtttcttgcagtgtttgagagagggtctgctaaactaaatgcagctatagca
gtgcatcccaattatccatccacgcctcctctgtttagagttaatatatcctggagaggt
gtgcatcatgctgttaatgatcacagtatccggatgatggagaatgaagtcaacgttcat
tttgatgagttcagtgaacatggagcatatgattatttattgaccaatcagctgcagcgt
ttgatgatgtgtttcgatgtgtatttggaagcagaatcagcttttggcacctcagctgca
ccagtagaatttgcgaaagagaaggtgatgccgagactgtctaggggaccgcatcgtgcc
aagccattcaaatacaacccacagcatggattcttcagtcacagatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (47)   

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