KEGG   Serpula lacrymans: SERLADRAFT_454838
Entry
SERLADRAFT_454838 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
sla  Serpula lacrymans
Pathway
sla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SERLADRAFT_454838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sla03019]
    SERLADRAFT_454838
Messenger RNA biogenesis [BR:sla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SERLADRAFT_454838
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SERLADRAFT_454838
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 18817084
NCBI-ProteinID: XP_007312415
JGI: 454838
UniProt: F8NE03
Position
Unknown
AA seq 136 aa
MDSLIPFTTSGSLVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERLYHENTFA
ENWHGIFVIRGENVVLLGEIDLDKEDDIPLNQVPYTILESYHRSNITSKKYRDDIKAQIL
YEQKGFCKEGGEGDGY
NT seq 411 nt   +upstreamnt  +downstreamnt
atggactcccttattccatttacaacttccggttcactggtagattgtgtggataggaaa
atgttagtgattttgagagacgggcgcaaacttcatggtgtcttgcgttcctacgaccag
tttgctaatctagttctggaggataccgtagagcgactgtatcatgaaaacacgtttgct
gagaattggcatggtatattcgtcattcgtggcgagaatgttgtcctgctgggcgagatt
gacctcgataaagaggatgatataccgttaaaccaagtgccttatactattttagagtca
taccaccgcagtaatatcacaagtaagaaataccgggacgacatcaaagctcaaatatta
tacgaacagaaagggttttgtaaagaaggcggggagggagatgggtactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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