KEGG   Serpula lacrymans: SERLADRAFT_467947
Entry
SERLADRAFT_467947 CDS       T03135                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
sla  Serpula lacrymans
Pathway
sla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SERLADRAFT_467947
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sla03019]
    SERLADRAFT_467947
Messenger RNA biogenesis [BR:sla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SERLADRAFT_467947
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     SERLADRAFT_467947
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 18819322
NCBI-ProteinID: XP_007318530
JGI: 467947
UniProt: F8NX36
Position
Unknown
AA seq 190 aa
MTHNSQAVLPGQPVAIPLGPTLQIGGGLYSKDGQVRASLIGVPRSKGSAITISRARPHVP
TVGSIVLGTVIRLSPLQAIVAITVVDGVPLPTGDEYTGVIRTQDVRGTEKDKVKIGDCFR
GGDVVKGLVISLGDARSNYITTARNDLGVIFATSEAGATLEPVSWQEMRCPKTGRIERRK
CAKPEGLQSS
NT seq 573 nt   +upstreamnt  +downstreamnt
atgacacacaactctcaagctgtattgcctggacagcccgttgcaattcctcttggtcca
acgcttcaaataggtggtggtctgtactcgaaggatggtcaagtaagagcaagtttaatc
ggtgtgccacgcagtaaaggatcggctataacgatatctcgcgctcggccacatgttcct
actgttggttcaatagtgcttggaacggttatacgtttatcgccattgcaagccatagtg
gccataactgtcgttgatggtgttcctttgcctactggcgatgaatatacgggcgtcatt
cgcactcaagacgtcagaggcacagaaaaggataaagtcaaaataggtgattgtttcaga
ggaggagatgtcgtaaaaggattggtgatatcgctcggcgatgctcgcagcaactacatc
accacggcacgcaatgacctaggcgtaattttcgctactagtgaagcaggtgccacgcta
gaacccgtgtcctggcaggaaatgcgctgcccaaagacaggacgaattgaaaggcgcaag
tgtgcaaaacctgagggtctccagtcatcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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