KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111661351
Entry
111661351         CDS       T06058                                 
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
  KO
K15212  TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slal03021]
    111661351 (taf1a)
Transcription machinery [BR:slal03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     111661351 (taf1a)
SSDB
Motif
Pfam: TAF1_subA COG4_N
Other DBs
NCBI-GeneID: 111661351
NCBI-ProteinID: XP_023270644
Ensembl: ENSSLDG00000024734
Position
Unknown
AA seq 428 aa
MMDDLDRELGPRVDLEDDSNSSDTNSAKGHKKSKLPLANPMCEETPDESGFHQSTRICLE
QIREAMLHHRWQEAAEYMACYPQMLEDPNQGSRPQYKELIMRLSTEILHHHPNSKLEDYN
NIYERMKHSGFKHYLMVSLEHSFHLLLHGHIEDAKHQLSVAESWRYGKESATQCQKTKLI
QAYRSLLDYIIWCDKKFTLSKTDHPDFSDNQEMRNYFRQASVNLKEILKNPGVWDPFILS
YVEMLEFYEDHREALNVLNDYAYDNSFPPNPNAHVYLYQYLKRHDTSQRKLMKVLKILHV
LVPSHELMLEYSFLLLQSEKTSDHQKALGVVLEMLDFACWRSNMDAWKLLKAIIQKLQLQ
EDWKTVVHEKMAGRTDFWPALHFTSFHAIKDSEENPELMEVKASLAKVLCPDLILKYTAG
GVTNAERT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgatggatgacttggatagagagctggggcctcgtgtagatttagaggatgacagcaac
tcttcagacaccaactctgcaaaaggacataaaaaatcaaagctccctctggctaatccc
atgtgtgaagagacaccggatgaatctgggtttcaccaaagtaccaggatctgtttggag
cagatcagagaagccatgctacatcatagatggcaagaggcagcagaatatatggcatgt
tacccccaaatgttagaagatccaaatcaaggctccagaccgcagtataaagagcttatt
atgagactcagcactgagatccttcatcatcaccccaactcaaagctggaagactacaac
aacatctatgaacgaatgaaacattcaggatttaagcattacctgatggtcagtctggaa
cattccttccacctgctgctccatggtcacattgaagatgcaaagcatcaattgtctgtt
gctgaaagttggaggtatggaaaggagtcagcaactcagtgtcagaagactaaactgatc
caggcctacaggagcctgctggattatatcatctggtgtgacaaaaagttcacactctct
aagactgaccaccccgacttcagtgacaaccaagagatgcgtaactacttcagacaggcc
tctgtgaatcttaaggagattttgaaaaatcctggtgtctgggaccccttcatactgagt
tacgttgagatgctggagttctatgaggatcacagggaggctttgaacgtcctgaatgac
tacgcctatgacaacagttttccacccaatcccaatgcgcatgtctatctgtaccagtac
ctaaagcggcacgacacttcgcagaggaaactgatgaaagtgttgaagatcctccatgtt
ttagtcccaagccacgagttgatgttggagtacagctttctcctgcttcagtcagagaaa
acaagtgatcaccaaaaagctttaggagtcgttctagaaatgttggacttcgcctgctgg
aggagcaacatggacgcgtggaaacttttaaaggccattattcagaaactgcagttacaa
gaagactggaaaacggttgtccatgaaaaaatggctggaagaacagacttttggcctgcg
ctgcacttcacaagcttccacgccattaaagactccgaggagaacccagagctgatggag
gtgaaagcgtcactggcaaaagtcctctgccctgacctgattcttaagtacactgctgga
ggggtaaccaatgcagagaggacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system