KEGG   Sugiyamaella lignohabitans: AWJ20_4863
Entry
AWJ20_4863        CDS       T05270                                 
Symbol
MSD1
Name
(RefSeq) aspartate--tRNA ligase MSD1
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AWJ20_4863 (MSD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:slb01007]
    AWJ20_4863 (MSD1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slb03016]
    AWJ20_4863 (MSD1)
   03029 Mitochondrial biogenesis [BR:slb03029]
    AWJ20_4863 (MSD1)
Enzymes [BR:slb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     AWJ20_4863 (MSD1)
Amino acid related enzymes [BR:slb01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AWJ20_4863 (MSD1)
Transfer RNA biogenesis [BR:slb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AWJ20_4863 (MSD1)
 Prokaryotic type
   Other AARSs
    AWJ20_4863 (MSD1)
Mitochondrial biogenesis [BR:slb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AWJ20_4863 (MSD1)
SSDB
Motif
Pfam: tRNA-synt_2
Other DBs
NCBI-GeneID: 30037041
NCBI-ProteinID: XP_018736389
UniProt: A0A167ECQ3
Position
D:complement(764663..766093)
AA seq 476 aa
MEIETPLLFKSTPEGASEFLVPTRRKGLMYALPQSPQQYKQLLMASGVHGYYQIARCFRD
EDLRADRQPEFTQLDLEMSFASGQDIRRVVETVVQNVWSGVLDIPMYTLTADGKYLEKVD
SDSPNAFRSLSYNSAISRFGIDKPDLRSSLEIIDLSDSAKAIESPEYPIIEALVIRPEVN
GSFTQEQIDFLSDEKSYKARIPKIALITESDLASIEQTVERILPPSVVNITDKTRFYREL
SLQTGDIVAFSTRQQLSYENPTPLGRFRQLAIEQFPNQYLRTGADGQPLITPDDFVATWV
DDFPLFNPVETTQPEVNTSNSTTSTRVDYPKFDLTSYVSTHHPFTMVHMDDYELLSTAPL
QARGQHYDLVINGVEVGGGSTRIHDTKLQKYIFEEILNITNSKALFGHLLEAFDTGCPPH
AGLAIGFDRMTAMLSRTSSIRDVIAFPKTITGADPLIGSPSKVKPSQLGPYHIRTM
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggaaatagaaacaccattgttgttcaagtcgactccagaaggagcaagcgagttcctt
gtcccgaccagaaggaaaggactgatgtatgcattacctcagagcccacaacagtacaaa
caactgctcatggcttctggagttcatggatactatcagattgctcgttgttttcgagac
gaagacttgcgtgccgaccgccagccagaattcacccagctggatctggaaatgagtttt
gccagtggccaggatattcgacgggtcgttgaaaccgttgtacagaacgtctggtcgggt
gtcctcgatattcctatgtatacattgacagccgatggaaagtacttggaaaaagtcgac
tccgacagccctaacgcttttagaagcttgtcttataacagtgccatcagcaggtttggc
atcgataaaccggatctacgaagtagtcttgaaattattgatctctcagactctgctaaa
gccatagagagcccagagtatccaattattgaagcactcgtgatccgtcccgaagtaaac
ggttcctttacccaagagcagatcgactttctatccgacgaaaagagctataaagcgaga
atacccaagatagccctgataacagagtctgatcttgcgtctatagagcagactgttgaa
agaatcctgccccctagcgttgtaaatattacagacaagacccgattctacagggaattg
tcgctacaaactggagacattgtggcatttagcacgcgacagcaactatcatatgagaat
cccactcctcttggcaggttcagacagcttgctattgaacaattccccaaccagtatctc
agaactggagctgatggccaacctctcatcaccccagacgactttgtagctacctgggtc
gatgatttcccactattcaaccctgtagagaccacccaacctgaagtcaacacttcaaac
tcaactacttctactcgagtagactacccaaaattcgaccttacatcttacgtatcaaca
caccacccgttcaccatggttcacatggacgactacgagcttctgtcgaccgcaccactg
caagcccgaggccagcattacgatctcgtcatcaatggggtagaagtcggcggtggcagt
acacgtatccacgacaccaaactacaaaagtacattttcgaagaaatcctcaacatcacc
aactccaaggcacttttcgggcaccttctcgaagccttcgacacgggctgtccaccacac
gccggtctcgccatcgggttcgaccgcatgaccgccatgctctcacgaacctcctcgatc
cgcgacgtcatcgcgttccccaaaaccatcaccggcgccgacccgctcatcggcagcccc
agcaaagtcaagccctcgcaactggggccctaccacatccgcaccatgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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