KEGG   Sugiyamaella lignohabitans: AWJ20_4956
Entry
AWJ20_4956        CDS       T05270                                 
Symbol
SKI8
Name
(RefSeq) SKI complex subunit WD repeat protein SKI8
  KO
K12601  superkiller protein 8
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWJ20_4956 (SKI8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slb03019]
    AWJ20_4956 (SKI8)
Messenger RNA biogenesis [BR:slb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     AWJ20_4956 (SKI8)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A WDR54 RMC1_N
Other DBs
NCBI-GeneID: 30037144
NCBI-ProteinID: XP_018736479
UniProt: A0A167EF90
Position
D:join(1064005..1064046,1064506..1064511,1064592..1065479)
AA seq 311 aa
MKINFSTAARLLHELTILLWNNKDPEPKSAVKLNSPSSGTHHLSTDRSGRWLVAVSFDGK
ATLYDLDNLAGENGGSGRLLFEDVWAVAIEPNARHVVASQITGDIAVWDISAITEETPDQ
TTESAASQPQIKRIQKFSGNGGVLGLSVDFASNEEHVAAGFESGAIHVYNYKTGRLEYSL
TGHSNPIRTVKFSPAATLLAIGGDSKLISLYSMTSGEHITNLTGSDGWVFGLDWNETGEF
LLSASYDGRSRVWWLESRQCVAAQNDSSQPLFGCKWLKKGWGVGVIGGINQGFATVGVDK
TLRWYREAAGN
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaaaataaatttcagcacagccgcgcgtctacttcacgaactaactatactgctgtgg
aataataaggatccagagcccaaaagtgctgttaaattgaactccccgtcttctggtaca
catcatttgagcactgataggtcgggtcgatggctggtagcagtgtcgtttgatggaaag
gccactttatacgatttagacaacctggcaggtgagaacggtggttctggaagattgctg
tttgaagatgtatgggctgtggctatagaacccaatgcccgtcatgtggtggcttcacag
atcacaggtgatattgctgtatgggatatttctgcaattactgaggaaactcctgaccaa
acgacggaatcagcagcctcgcaaccacagatcaaacgcattcaaaagttttctggtaat
gggggagttcttggtctaagtgttgactttgcatcgaatgaagagcatgtggcagcaggg
tttgaaagtggtgccattcatgtctataactataaaaccggccgtctggagtattctctg
accggccattcgaatccgattaggaccgtcaaattctcaccagcagctactttattggcc
attggcggcgattcgaagctcatttctttatatagcatgacatcaggcgagcatatcacg
aacctaactggtagcgatggatgggtgtttggactcgactggaatgagaccggcgagttc
ttactcagtgcgtcttatgacggccggtctcgagtctggtggctcgaaagcaggcaatgc
gtggctgctcaaaacgactccagccagcccttattcggatgcaaatggctcaaaaaaggc
tggggtgtcggcgtcatcggcggtatcaaccaaggttttgccacggtcggcgtcgacaaa
actctgcgctggtaccgcgaagctgctggcaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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