KEGG   Spirosoma linguale: Slin_3612
Entry
Slin_3612         CDS       T01156                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sli  Spirosoma linguale
Pathway
sli03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Slin_3612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sli03400]
    Slin_3612
DNA repair and recombination proteins [BR:sli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Slin_3612
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Slin_3612
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_16 AAA_22 AAA_5 DUF87 DUF2785 UB2H Kinesin AAA_33
Other DBs
NCBI-GeneID: 8727365
NCBI-ProteinID: ADB39619
UniProt: D2QR65
Position
4366277..4368298
AA seq 673 aa
MNFKLTSEFQPTGDQPKAIEKLVKGVNEGEPAQVLLGVTGSGKTFTIANLIARTNRPTLV
LSHNKTLAAQLYGEFKQFFPENAVEYFISYYDYYQPEAYIATTNTYIEKDLAINEEIDKL
RLAATSALMSGRRDVIVVASVSCIYGMGNPEEFKRNVVRIGVGEQMSRNNFLHQLVSILY
SRTEGEFQRGNFRVKGDTVDLYVAYADFAYRVIFFGDEIETIQRIDPGTGKKLSEESMVT
IFPANLFVTGRDTLNGAIYQIQDDMVAQVRYFESELREMEATRIRERTEFDLEMMRELGY
CSGIENYSRYFDKRLPGQRPFCLLDYFPDDFLMVVDESHVTIPQIRAMWGGDRSRKTALV
DYGFRLPSAMDNRPLTFQEFEDLSGQSIYVSATPSDYELRKSEGVVVEQLIRPTGLLDPE
IEVRPSLNQIDDLLEAIDGRIKRGERVLVTTLTKRMAEELTKYLDRVGIKTRYIHSEVKT
LDRVEILRDLRLGNFDVLVGVNLLREGLDLPEVSLVAIMDADKEGFLRDIRSLIQTIGRA
ARNANGKVIMYADRITGSMQKAIDETNRRRAIQLEYNTDNGITPTTVLKSRESIMGQTKV
ADSKAKHFYVEPEEIRIAADPVVRYMGKGDLEKIIQETQSKMERAAKDLDFMEAARLRDE
LFQLRDKLKKETA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgaactttaaactaacgtctgaatttcaaccaaccggcgatcagccgaaggcaatcgaa
aagttggtgaagggtgtaaacgaaggcgaacccgcacaggtactgcttggcgttacaggc
tctggcaaaacgtttacaattgcgaacctcatcgcgcgaaccaaccgtccaacgcttgta
ctgagccataacaaaacattggccgcccaactttacggggaattcaaacagtttttcccc
gagaacgccgtcgagtacttcatctcttactatgactactaccagcccgaagcgtacatc
gccacgaccaatacgtacattgaaaaggacctggcgatcaatgaagaaattgataagctg
cgactggcagctacctcagccctgatgagcggccgacgcgacgttattgtggtagcttcg
gtgtcctgcatttacggcatgggcaaccccgaagaatttaaacgcaatgtggtgcgcatt
ggcgttggcgagcagatgagccgcaacaacttcctgcaccagttggtcagcatcttgtac
agccggactgaaggcgaatttcagcgcggcaacttccgtgtgaaaggcgacacggtggat
ttgtacgtggcctatgctgattttgcctatcgcgttatcttcttcggcgatgagattgaa
acgattcagcgtattgaccccggcaccggcaagaagttgtcggaagagagtatggtcact
atttttccggccaatctgttcgtaaccgggcgcgatacactcaacggagctatctatcag
attcaggacgacatggttgcgcaggtgcgttatttcgaatcagaacttcgcgaaatggaa
gcaacccgcattcgggaacggacagaatttgaccttgagatgatgcgcgaactcggctat
tgttcgggtattgagaactactcccgctatttcgacaaacgcctgcccggtcagcggccg
ttctgcctgcttgactacttcccggacgattttctgatggttgttgacgaaagccacgtg
accattccgcaaatcagagccatgtggggtggcgaccgttcgcgtaaaacagcgctcgtg
gattatggcttccggcttccgtcggctatggacaaccgcccactcacctttcaggaattt
gaagacctgtcgggtcagtcgatttatgtatccgctacgccttccgactacgaactccgc
aaaagtgaaggggtagttgttgaacagttgatccggccaactggtctgctggaccccgaa
attgaggtgcgcccgagtttgaatcagattgacgatttgctcgaagccatcgacggccgc
atcaaacgtggggagcgtgtactggttacaaccctgaccaaacgaatggccgaagagcta
accaaatacctggatcgcgtaggtattaaaacccggtacattcactccgaagtgaaaacg
ctggaccgggtcgaaattctccgcgatttacgactgggcaatttcgatgtgctggtgggt
gtcaacctgcttcgggagggccttgacctgcccgaagtctcgctggtggcgattatggat
gccgataaggaaggttttctgcgcgacatccggtcactgatccagaccattggccgggct
gcccgtaatgccaacggcaaagtgattatgtatgccgaccggattacgggctccatgcaa
aaagctattgacgaaacgaaccgacggcgggctattcagttggaatacaacacagataat
ggcattaccccaacgacggtgttgaaatcgcgtgagtcaatcatgggccaaaccaaggta
gccgattcgaaagcaaaacatttctacgtcgaacccgaagaaatccgaattgctgccgat
cctgtcgttcgatacatgggcaagggtgatttggagaaaataattcaggagactcaatcc
aagatggagcgggccgctaaagacctcgactttatggaagccgctcgcctgcgggatgag
ttgttccagttacgtgataagctaaagaaggaaaccgcgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (31)   

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