KEGG   Spiroplasma litorale: SLITO_v1c03560
Entry
SLITO_v1c03560    CDS       T04047                                 
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
sll  Spiroplasma litorale
Brite
KEGG Orthology (KO) [BR:sll00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sll03019]
    SLITO_v1c03560 (cshB)
   03009 Ribosome biogenesis [BR:sll03009]
    SLITO_v1c03560 (cshB)
Enzymes [BR:sll01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SLITO_v1c03560 (cshB)
Messenger RNA biogenesis [BR:sll03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SLITO_v1c03560 (cshB)
Ribosome biogenesis [BR:sll03009]
 Prokaryotic type
  rRNA helicases
   SLITO_v1c03560 (cshB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Flavi_DEAD PhoH Occludin_ELL
Other DBs
NCBI-ProteinID: AKX34010
UniProt: A0A0K1W103
Position
389455..390816
AA seq 453 aa
MSFEKFGFKKFINDAIVEIGFKEPTGIQNKVIPLLKKYSSVIAQSHTGTGKTHAFLLPVI
NNIKQQEKKVQCLIITPTRELARQIFNNTKELLKFNNDINVSMFVGGEDFEKHTNSLLDK
QPQIVIGTPSRLKKLYEENYLKLTTSNYVIIDECDMIFDLGFIDEVDFLLSKINKECNIS
LFSATLNNELKPFLKKYLKNAHYINNLENLSTNKNIEHILIWTRNKDNKEVIRILTEKIN
PYVCIIFVNKKEEIKSIVNWFKEFKIDNFTELHGDLDPRQRVIIQKRIKNMDFKWIIASD
VAARGIDIDGVSHIISVNLPNDLNYYIHRSGRTGRNKYEGISYVLHNSDNQDKINKLKTK
NISFTNMKLVNGELIKIEQKQKKQPKENSALATETSKIINKYKSKKIKPGYKKKRKLEIE
TFKKQLKRKHIKESIEKIKKAKYIKRREDLFEE
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgagttttgaaaagtttggatttaaaaaatttataaatgatgcaattgtcgaaattggt
tttaaagaaccaacaggaatacaaaataaagtaatacctttattaaaaaaatattcttct
gtaattgctcaatctcatacaggtactggtaaaactcatgcttttttgttacctgttata
aataatataaaacaacaagaaaaaaaagttcagtgtttaataataacaccaacaagagaa
cttgcaagacaaatttttaacaacacaaaagaattgttaaaatttaataatgatataaat
gtttcaatgtttgttggtggagaagattttgaaaaacacactaattctttattagataaa
caaccacaaattgtaattggaaccccttcaagacttaaaaaattatatgaagaaaattat
ttaaaattaacaacttcaaattatgtaattattgatgaatgtgatatgatatttgacctt
ggttttatagatgaagtagattttttattatcaaagatcaacaaagaatgcaatatatct
ttattttctgcaactttaaataatgaattaaaaccttttttaaaaaaatatctaaaaaat
gcacactacataaataatttagaaaatttatcaactaacaaaaatatagaacatatatta
atatgaactagaaataaagataataaggaagttattagaattttaacagaaaaaataaat
ccctatgtttgtattatttttgtaaataaaaaagaggaaattaaaagtattgtaaactga
tttaaagagttcaagattgataattttacagaattgcatggtgatttagatccaaggcaa
agagtaataatacaaaaaagaataaaaaatatggattttaaatgaattatagcaagtgac
gttgctgctagaggaattgacattgatggtgtaagtcacataatttctgttaatttacca
aatgatttaaattattatattcatcgtagtgggagaacaggaagaaataaatatgaagga
ataagttatgttcttcataattctgataaccaagataaaattaataaattaaaaactaaa
aatatttcttttacaaatatgaaattagtaaacggtgaattgataaaaatcgaacaaaaa
caaaaaaaacaacccaaagaaaactcagcacttgcgactgagacaagtaaaataataaac
aaatataaatcaaaaaaaattaaaccaggttacaaaaaaaagcgtaaacttgaaatagaa
acatttaaaaaacagttaaaaagaaaacacattaaagaatcaattgaaaaaattaaaaaa
gcaaaatacataaaaagaagagaagatttatttgaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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